Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_18700 |
Symbol | rnt |
ID | 4381493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1609324 |
End bp | 1609998 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639324049 |
Product | ribonuclease T |
Protein accession | YP_789637 |
Protein GI | 116051527 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.145132 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAG ACAACTTCGA CGACGAATTC GACGGCAGCC TCCCCAGCGG CCCGCGCCAT CCGATGGCGC GCCGCTTCCG CGGCTACCTG CCGGTAGTGG TGGACGTCGA GACCGGCGGC TTCAACTCGG CCACCGACGC GCTGCTGGAA ATCGCCGCGA CCACTGTCGG CATGGACGAG AAAGGCTTCC TGTTCCCGGA ACACACCTAC TTCTTCCGCA TCGAGCCCTT CGAAGGCGCC AACATCGAGC CGGCCGCGCT GGAATTCACC GGCATCAAGC TTGACCACCC GCTGCGCATG GCGGTGCAGG AGGAAGCGGC ACTCACCGAG ATCTTCCGCG GCATCCGCAA GGCGCTGAAG GCCAATGGCT GCAAGCGGGC GATCCTGGTC GGCCACAACA GCAGCTTCGA CCTCGGTTTC CTCAATGCCG CCGTGGCGCG TACCGGGATC AAGCGCAATC CGTTCCATCC CTTCTCCAGC TTCGACACCG CCACCCTGGC TGGCCTCGCC TACGGCCAGA CGGTCCTGGC CAAGGCCTGC CAGGCCGCCG GCATGGAGTT CGACAACCGC GAGGCGCACT CGGCACGCTA CGACACCGAG AAGACCGCCG AGCTGTTCTG CGGCATCGTC AACCGCTGGA AGGAAATGGG CGGCTGGATG GATGACGACG ACTGA
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Protein sequence | MSEDNFDDEF DGSLPSGPRH PMARRFRGYL PVVVDVETGG FNSATDALLE IAATTVGMDE KGFLFPEHTY FFRIEPFEGA NIEPAALEFT GIKLDHPLRM AVQEEAALTE IFRGIRKALK ANGCKRAILV GHNSSFDLGF LNAAVARTGI KRNPFHPFSS FDTATLAGLA YGQTVLAKAC QAAGMEFDNR EAHSARYDTE KTAELFCGIV NRWKEMGGWM DDDD
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