Gene PA14_18600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_18600 
Symbol 
ID4381503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1597097 
End bp1598179 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content68% 
IMG OID639324039 
ProductABC transporter ATP-binding protein 
Protein accessionYP_789627 
Protein GI116051537 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0152976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACG ACCTGCTGCT GAACCTGAAA GATCTCGCCT GCGGCTACGC CTCGCAGAAA 
GTGGTGCAGG ACCTCGACCT GCACCTCAAT GCCGGAGACA TCGGCTGCCT GCTGGGTCCT
TCGGGATGCG GCAAGACCAC CACCCTGCGC GCCATCGCCG GCTTCGAGCC GGTGCTGGCC
GGGCAGATCG AGCTGGGCGG CGAAGTCATC TCGCGTCCCG GCTTCACCCT GGCGCCGGAG
AAACGCCGGA TCGGCATGGT GTTCCAGGAC TACGCGCTGT TCCCGCATCT CAGCGTGGCC
GACAATGTCG GCTTCGGCAT CCGCAAGCAT CCACAACGCG AGCGCCTGGT GCGCGAGCTT
CTGGAGCTGG TCAAGCTCGA CCACCTCGCC GCGCGCCACC CCCACGAACT CTCCGGCGGC
CAGCAACAAC GGGTGGCCCT GGCCCGCGCG CTGGCGCCCG AACCGCTGTT GCTGCTGCTC
GACGAACCCT TCTCCAACCT CGACGTGGAA CTGCGCCGCA GCCTCAGCCA GGAGGTTCGC
GAGATCCTCA AGGCACGCGG CACCAGCGCG ATCCTGGTGA CCCACGACCA GGAAGAAGCC
TTCGCCGTCT GCGACCACAT CGGCGTGTTC AAGGAAGGTC ACCTGGAACA GTGGGACACC
CCCTACAACC TCTACCACGA GCCGCTGACG CCCTTCGTCG CCAGCTTCGT CGGCCAGGGC
TACTTCATTC GCGGCCAGTT GCTCAGCCCC GATACGGTGC AGACCGAACT CGGCGTGATC
CGCGGCAATC GCGCCTACAG CCTGCCTTCC GGCAGCGCGG TAGACGTCCT GCTGCGCCCG
GACGACCTGG TGCACGCGCC GCAGGGCGAG CTGAAGGCGC GGATCGTCGG CAAGACCTTC
CTCGGCGCCG CCACCCTGTA CCGCCTGCAA TTACCCACCG GTACCCAGCT GGAATCGATC
TTCCCCAGCC ATGCCGACCA CCAGCCGGGC GATGACGTCG GTATCCGCGT CGCCGCCGAC
CACCTGGTGG TGTTCGCCGC CCGGGGCAGC GTCGCCGCGC ACCTCGCTCC CGTCCAGGCC
TGA
 
Protein sequence
MSHDLLLNLK DLACGYASQK VVQDLDLHLN AGDIGCLLGP SGCGKTTTLR AIAGFEPVLA 
GQIELGGEVI SRPGFTLAPE KRRIGMVFQD YALFPHLSVA DNVGFGIRKH PQRERLVREL
LELVKLDHLA ARHPHELSGG QQQRVALARA LAPEPLLLLL DEPFSNLDVE LRRSLSQEVR
EILKARGTSA ILVTHDQEEA FAVCDHIGVF KEGHLEQWDT PYNLYHEPLT PFVASFVGQG
YFIRGQLLSP DTVQTELGVI RGNRAYSLPS GSAVDVLLRP DDLVHAPQGE LKARIVGKTF
LGAATLYRLQ LPTGTQLESI FPSHADHQPG DDVGIRVAAD HLVVFAARGS VAAHLAPVQA