| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_18580 |
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| Symbol | algD |
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| ID | 4381505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 1593998 |
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| End bp | 1595308 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639324037 |
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| Product | GDP-mannose 6-dehydrogenase AlgD |
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| Protein accession | YP_789625 |
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| Protein GI | 116051539 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.156779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATCA GCATCTTTGG TTTGGGCTAT GTCGGTGCAG TATGTGCTGG CTGCCTGTCG
GCACGCGGTC ATGAAGTCAT TGGTGTGGAT GTCTCCAGCA CCAAGATCGA CCTGATCAAC
CAGGGCAAGT CGCCCATCGT CGAACCGGGC CTGGAAGCGT TGTTGCAGCA AGGCCGGCAG
ACCGGACGGC TGTCGGGCAC CACCGATTTC AAGAAGGCCG TGCTGGACTC CGACGTATCG
TTCATCTGCG TCGGCACGCC GAGCAAGAAG AACGGCGACC TGGACCTGGG CTACATCGAG
ACCGTCTGCC GCGAGATCGG CTTCGCCATC CGCGAGAAGT CCGAACGCCA CACCGTGGTG
GTGCGCAGCA CCGTACTGCC GGGCACCGTC AACAACGTGG TGATCCCGCT GATCGAGGAC
TGCTCGGGCA AGAAGGCCGG GGTCGACTTC GGCGTCGGCA CCAACCCCGA ATTCCTCCGC
GAGAGCACCG CGATCAAGGA CTACGACTTC CCGCCGATGA CCGTGATCGG CGAACTGGAC
AAGCAGACCG GCGACCTTCT CGAGGAAATC TACCGCGAGC TGGACGCGCC GATCATCCGC
AAGACCGTCG AGGTCGCCGA GATGATCAAG TACACCTGCA ACGTCTGGCA CGCCGCCAAG
GTCACCTTCG CCAACGAGAT CGGCAACATC GCCAAGGCGG TCGGCGTCGA CGGCCGCGAG
GTGATGGACG TGATCTGCCA GGACCACAAG CTCAACCTGT CGCGCTACTA CATGCGTCCC
GGCTTCGCCT TCGGCGGCTC CTGCCTGCCC AAGGATGTAC GCGCCCTCAC CTATCGCGCC
AGCCAGCTGG ACGTCGAGCA CCCGATGCTC GGTTCGTTGA TGCGCAGCAA CTCCAACCAG
GTGCAGAAGG CCTTCGATCT CATCACCAGC CACGACACCC GCAAGGTCGG CCTGCTCGGC
CTGTCGTTCA AGGCCGGCAC CGACGATTTG CGCGAAAGCC CGCTGGTGGA GCTGGCCGAG
ATGCTCATCG GCAAGGGCTA CGAGTTGCGC ATCTTCGACC GCAACGTCGA ATACGCGCGT
GTCCACGGGG CCAACAAGGA ATACATCGAG TCGAAGATCC CGCACGTCTC CTCACTGCTG
GTCTCCGACC TCGACGAAGT GGTGGCGAGT TCCGATGTGC TGGTGCTGGG CAATGGCGAC
GAGCTGTTCG TCGACCTGGT GAACAAGACC CCGAGCGGCA AGAAGCTGGT CGACCTGGTG
GGCTTCATGC CGCACACCAC CACTGCCCAG GCCGAGGGCA TCTGCTGGTA G
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| Protein sequence | MRISIFGLGY VGAVCAGCLS ARGHEVIGVD VSSTKIDLIN QGKSPIVEPG LEALLQQGRQ
TGRLSGTTDF KKAVLDSDVS FICVGTPSKK NGDLDLGYIE TVCREIGFAI REKSERHTVV
VRSTVLPGTV NNVVIPLIED CSGKKAGVDF GVGTNPEFLR ESTAIKDYDF PPMTVIGELD
KQTGDLLEEI YRELDAPIIR KTVEVAEMIK YTCNVWHAAK VTFANEIGNI AKAVGVDGRE
VMDVICQDHK LNLSRYYMRP GFAFGGSCLP KDVRALTYRA SQLDVEHPML GSLMRSNSNQ
VQKAFDLITS HDTRKVGLLG LSFKAGTDDL RESPLVELAE MLIGKGYELR IFDRNVEYAR
VHGANKEYIE SKIPHVSSLL VSDLDEVVAS SDVLVLGNGD ELFVDLVNKT PSGKKLVDLV
GFMPHTTTAQ AEGICW
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