| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_18510 |
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| Symbol | algE |
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| ID | 4381508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 1588212 |
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| End bp | 1589684 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639324033 |
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| Product | alginate production outer membrane protein AlgE |
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| Protein accession | YP_789621 |
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| Protein GI | 116051542 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00972901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCT CCCGTTCCGT CAACCCGCGG CCGTCCTTCG CGCCGCGCGC CCTGTCCCTG
GCCATCGCCC TGCTGCTCGG CGCGCCGGCG TTCGCCGCCA ACAGCGGCGA GGCGCCGAAG
AACTTCGGCC TGGACGTGAA GATCACCGGC GAATCGGAAA ACGATCGCGA CCTCGGCACC
GCTCCCGGCG GCACCCTCAA CGACATCGGT ATCGACCTGC GGCCCTGGGC CTTCGGCCAG
TGGGGCGACT GGAGCGCCTA CTTCATGGGC CAGGCGGTGG CCGCCACCGA CACCATCGAG
ACCGACACCC TGCAATCGGA CACCGACGAC GGCAACAACA GCCGCAACGA CGGTCGCGAG
CCGGACAAGA GCTACCTCGC CGCACGCGAA TTCTGGGTCG ACTACGCCGG CCTCACCGCC
TACCCCGGCG AGCACCTGCG CTTCGGCCGC CAGCGCCTGC GGGAAGACAG CGGCCAGTGG
CAGGACACCA ACATCGAGGC GCTGAACTGG AGCTTCGAGA CCACCCTGCT CAACGCCCAT
GCCGGGGTCG CCCAGCGTTT CAACGAATAC CGCACCGACC TCGACGAACT GGCTCCGGAG
GACAAGGACC GCACCCATGT GTTCGGCGAC ATCTCCACCC AGTGGGCGCC GCACCACCGC
ATCGGCGTGC GCATCCACCA CGCCGACGAC AGCGGCCACC TGCGCCGCCC CGGCGAGGAA
GTCGACAACC TCGACAAGAC CTATACCGGC CAGCTCACCT GGCTCGGCAT CGAGGCTACC
GGCGATGCCT ACAACTATCG TTCGAGCATG CCGCTGAACT ACTGGGCCAG CGCCACCTGG
CTGACCGGCG ACCGCGACAA CCTGACCACC ACCACGGTCG ACGACCGGCG CATCGCCACC
GGCAAGCAGA GCGGCGACGT CAATGCCTTC GGCGTCGACC TCGGCCTGCG CTGGAACATC
GACGAGCAAT GGAAGGCCGG CGTCGGCTAC GCCCGCGGCA GCGGCGGTGG CAAGGACGGC
GAGGAGCAGT TCCAGCAGAC CGGGCTGGAG AGCAATCGCT CCAACTTCAC CGGCACCCGC
TCGCGCGTGC ACCGCTTCGG CGAAGCCTTC CGCGGCGAAC TGAGCAACCT CCAGGCAGCC
ACCCTGTTCG GCTCCTGGCA ACTGCGCGAG GACTACGACG CGAGCCTGGT CTACCACAAG
TTCTGGCGCG TCGACGACGA CTCCGACATC GGCACCAGCG GCATCAACGC CGCCCTGCAA
CCGGGCGAGA AGGACATCGG CCAGGAACTC GACCTGGTGG TGACCAAGTA CTTCAAGCAA
GGCCTGCTGC CGGCCTCGAT GAGCCAGTAC GTCGACGAGC CCTCGGCGCT GATCCGCTTC
CGCGGCGGCC TGTTCAAGCC GGGCGACGCC TACGGGCCGG GCACCGACTC GACCATGCAC
CGCGCCTTCG TCGACTTCAT CTGGCGCTTC TGA
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| Protein sequence | MNSSRSVNPR PSFAPRALSL AIALLLGAPA FAANSGEAPK NFGLDVKITG ESENDRDLGT
APGGTLNDIG IDLRPWAFGQ WGDWSAYFMG QAVAATDTIE TDTLQSDTDD GNNSRNDGRE
PDKSYLAARE FWVDYAGLTA YPGEHLRFGR QRLREDSGQW QDTNIEALNW SFETTLLNAH
AGVAQRFNEY RTDLDELAPE DKDRTHVFGD ISTQWAPHHR IGVRIHHADD SGHLRRPGEE
VDNLDKTYTG QLTWLGIEAT GDAYNYRSSM PLNYWASATW LTGDRDNLTT TTVDDRRIAT
GKQSGDVNAF GVDLGLRWNI DEQWKAGVGY ARGSGGGKDG EEQFQQTGLE SNRSNFTGTR
SRVHRFGEAF RGELSNLQAA TLFGSWQLRE DYDASLVYHK FWRVDDDSDI GTSGINAALQ
PGEKDIGQEL DLVVTKYFKQ GLLPASMSQY VDEPSALIRF RGGLFKPGDA YGPGTDSTMH
RAFVDFIWRF
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