Gene PA14_18480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_18480 
SymbolalgX 
ID4381510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1585123 
End bp1586547 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content67% 
IMG OID639324031 
Productalginate biosynthesis protein AlgX 
Protein accessionYP_789619 
Protein GI116051544 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC GCACTTCCCG ACTGTTCCGC CTGAGCGCCC TGGCCGCCGG CCTCTGCCTG 
GCCCAGGCAG CCCTCGCCGC CGACCCCGGC GCGGCGCCGA GCTACCAGGC GCTGCCGGCC
GGCAACCTGT GCCCGGCCGC CGCCGACGAC TCGCGCTACA ACACCAAGTA CCTGGGCTTC
TTCACCCACC TGGTGCAGGC CCAGGATGAC TGGCTGTTCC GCACCACCTA CGACCTGCGT
ACCGACTTCG GCACCAGCGC CGAAGGCTGG CGCGAACTCC GCGCACTGCG CGACGAACTC
AAGCGCAAGG GCATCGAGCT GGTGGTGGTC TACCAGCCAA CCCGCGGCCT GGTGAACCGC
GAGAAGCTCA GCCCGGCGGA AAAGGCCGGC TTCGACTACG AGCTGGCGAA GAAGAACTAC
CTGGCGACCA TCGCCCGCTT CCGCCAGGCC GGCATCTGGA CCCCGGACTT CTCGCCGCTG
TTCGACGAGA AGGAGGAGCA CGCCTACTAC TTCAAGGGCG ACCACCACTG GACTCCCCAT
GGCGCCCGGC GCAGCGCGAA GATCGTGGCC GAGACGCTGA AGCAGGTGCC CGGCTTCGAG
GAGATCCCCA AGAAGCAGTT CGAAAGCAAG CGCGTCGGCC TGCTGTCCAA GCTCGGCACC
TTCCACAAGG CCGCCGCGCA ACTCTGCGGC AACAGCTACG CCACCCAGTA CGTCGACCGC
TTCGAGACCG AGCCGGTGGG CGCCAGCGAC AGCGGCGACC TGTTCGGCGA CGGCGGCAAC
CCGCAGATTG CCCTGGTCGG CACCTCCAAC AGCGGCCCGG CCTACAACTT CGCCGGCTTC
CTGGAGGAGT TCAGCGGCGC CGACATCCTC AACAACGCGG TGTCCGGCGG CGGCTTCGAC
AGTTCGCTGC TGGCGTACAT GACCAGCGAG GAATTCCACA AGAACCCGCC GAAGATCCTC
ATCTGGGAAT TCGCCACCCA CTACGACATG GCGCAGAAGA GCTTCTACCG CCAGGCCATG
CCGCTGGTGG ACAACGGCTG CTCCGGCCGG AAGACCGTGC TCAGCCGCAA GGTCAAGCTG
CGCCAGGGCC GCAACGAGGT GCTGCTGAAC AGCGCCGCGC TACCGATCCG CAGCGGCAGC
TACGTCGCCG ACGTGACCTA CAGCGACCCT TCGGTACACG AGTTGAAGAA CACCATCTGG
TACATGAACG GCCGCCGCGA GCAGTTGAAG ATCGAGCAGT CGAAAGCCGT CGATACCGGC
GGCCGCTACG TCTTCCAGCT ACGCAACGAC AGCGACTGGG CCGACCAGCA GTTCCTTTCC
CTGGAAATCG AAGCGCCGGA GGACATGCCC CAGGGCCTGG AGGTCCAGGC CAGCATCTGC
CAGGCGGCGC CCGCCAAGGC CAGCCAGTCG GTGGCCGGGA GGTAA
 
Protein sequence
MKTRTSRLFR LSALAAGLCL AQAALAADPG AAPSYQALPA GNLCPAAADD SRYNTKYLGF 
FTHLVQAQDD WLFRTTYDLR TDFGTSAEGW RELRALRDEL KRKGIELVVV YQPTRGLVNR
EKLSPAEKAG FDYELAKKNY LATIARFRQA GIWTPDFSPL FDEKEEHAYY FKGDHHWTPH
GARRSAKIVA ETLKQVPGFE EIPKKQFESK RVGLLSKLGT FHKAAAQLCG NSYATQYVDR
FETEPVGASD SGDLFGDGGN PQIALVGTSN SGPAYNFAGF LEEFSGADIL NNAVSGGGFD
SSLLAYMTSE EFHKNPPKIL IWEFATHYDM AQKSFYRQAM PLVDNGCSGR KTVLSRKVKL
RQGRNEVLLN SAALPIRSGS YVADVTYSDP SVHELKNTIW YMNGRREQLK IEQSKAVDTG
GRYVFQLRND SDWADQQFLS LEIEAPEDMP QGLEVQASIC QAAPAKASQS VAGR