| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_18470 |
|---|
| Symbol | algL |
|---|
| ID | 4381511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 1584016 |
|---|
| End bp | 1585119 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639324030 |
|---|
| Product | poly(beta-D-mannuronate) lyase |
|---|
| Protein accession | YP_789618 |
|---|
| Protein GI | 116051545 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.622671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGT CCCACCTGAT CCGTATCGCC CTGCCCGGCG CCCTCGCCGC GGCATTGCTC
GCCAGCCAGG TCAGCCAGGC CGCCGACCTG GTACCCCCGC CCGGCTACTA CGCGGCGGTC
GGCGAGCGCA AGGGCAGCGC CGGCAGTTGC CCCGCGGTGC CGCCGCCGTA TACCGGCAGC
CTGGTCTTCA CCAGCAAGTA CGAAGGCTCC GATTCGGCGC GGGCGACCCT CAACGTCAAG
GCGGAGAAGA CCTTCCGCTC GCAGATCAAG GACATCACCG ACATGGAGCG CGGCGCCACC
AAGCTGGTCA CCCAGTACAT GCGCAGCGGC CGCGACGGCG ACCTGGCCTG CGCACTGAAC
TGGATGAGCG CCTGGGCCCG CGCCGGCGCC CTGCAGAGCG ACGACTTCAA CCACACCGGC
AAGTCCATGC GCAAATGGGC GCTGGGCAGC CTCTCCGGCG CCTACATGCG CCTGAAGTTC
TCCAGCTCGC GGCCGCTCGC GGCCCACGCC GAGCAGAGCC GGGAAATCGA GGACTGGTTC
GCCCGGCTCG GCACCCAGGT AGTCCGCGAC TGGAGCGGCC TGCCGCTGAA GAAGATCAAC
AACCATTCCT ACTGGGCGGC CTGGTCGGTG ATGTCCACCG CGGTGGTGAC CAACCGCCGC
GACCTCTTCG ACTGGGCGGT GAGCGAGTTC AAGGTCGCCG CCAACCAGGT CGACGAGCAG
GGCTTCCTGC CCAACGAACT CAAGCGCCGC CAGCGCGCCC TCGCCTACCA CAACTATGCG
CTGCCGCCGC TGGCGATGAT CGCCGCGTTC GCCCAGGTCA ACGGCGTCGA CCTGCGCCAG
GAGAACCACG GCGCCCTGCA GCGCCTGGCC GAGCGGGTGA TGAAGGGAGT CGACGACGAG
GAAACCTTCG AGGAGAAGAC CGGCGAGGAC CAGGACATGA CCGACCTCAA GGTCGACAAC
AAGTACGCCT GGCTGGAGCC CTACTGCGCC CTCTACCGCT GCGAGCCGAA GATGCTCGAG
GCGAAGAAGG ACCGCGAGCC GTTCAACAGT TTCCGCCTCG GCGGCGAAGT GACGCGGGTG
TTCAGCCGCG AAGGGGGAAG TTGA
|
|---|
| Protein sequence | MKTSHLIRIA LPGALAAALL ASQVSQAADL VPPPGYYAAV GERKGSAGSC PAVPPPYTGS
LVFTSKYEGS DSARATLNVK AEKTFRSQIK DITDMERGAT KLVTQYMRSG RDGDLACALN
WMSAWARAGA LQSDDFNHTG KSMRKWALGS LSGAYMRLKF SSSRPLAAHA EQSREIEDWF
ARLGTQVVRD WSGLPLKKIN NHSYWAAWSV MSTAVVTNRR DLFDWAVSEF KVAANQVDEQ
GFLPNELKRR QRALAYHNYA LPPLAMIAAF AQVNGVDLRQ ENHGALQRLA ERVMKGVDDE
ETFEEKTGED QDMTDLKVDN KYAWLEPYCA LYRCEPKMLE AKKDREPFNS FRLGGEVTRV
FSREGGS
|
|---|
| |