Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_18110 |
Symbol | mmsR |
ID | 4381534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1553474 |
End bp | 1554397 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639324006 |
Product | transcriptional regulator MmsR |
Protein accession | YP_789594 |
Protein GI | 116051568 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTATA TTGCGGAGCC GGCTACCGAC ATGTCGCACA CCTCCGACTG GCCCCTGCCG GCCGACAGCC TGCGCTTGCC GATCCCGGCG GCGCTGCTGG AGAAACTGGC GGTCCACCCG CTCAGCCGCG ACCTCTACCC CACCTCCCTG GGCCACTACC GGCGCGCCCG CGACCACCGC ATGAGCCGCG AGCGCCATGA CGAGCACCTG CTGATCTATT GCAGCGAAGG CCAGGGCCTG TTGCGCGTGC GCGAGGGCGA GGCCTGGCGC GAATACCGGG TCGGCAGCGG CGACCTGCTC TGGCTGCCGC CGGGCATGGC CCACGACTAC GCCGCCGACG ACCGCCAACC CTGGACCATC TTTTGGACCC ACCTGCGCGG CGACAGCGCC ACCTGGCTGC AACACAGCGC CGGCTACCGC GACACCCCGC TGCGCCATTG GGGCCTGCAA CACGCCCTGC TCGGCGGCTT CGAGCAACTG CTGGAGGTGC GCCACAGCGG CTACCGCTTC CAGCACTTCC TGCTCGCCGC CAGCCGCATG CGCAGCCTGC TCTGCCAGCT ACCGCTGCTG CGCCCGCTGC GCGAGGGCAG CCTGGACCTC GACGGGCTGC ACGCCTACAT GCGTGAACAC CTGCATGCGC GCCTCGAACT GGAACGCCTG GCGGCCTTCT GCAACCTGTC GAAGTTCCAT TTCGTCAGTC GCTACAAGGC GATCACCGGC CGTACGCCTA TCCAGCACTT CCTGCACCTG AAGATCGAGT ACGCCTGCCA GTTGCTGGAC AGCAGCGACC AGAGCGTGGC CCGGGTCGGC CAGGCGGTCG GCTACGACGA CAGCTACTAC TTCTCGCGCC TGTTCAGCAA GGTCATGGGT TTGTCGCCGA GCGCCTACCG ACAGCGGGTA AGGCAGGGCG AGGGAGGAGC CTGA
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Protein sequence | MDYIAEPATD MSHTSDWPLP ADSLRLPIPA ALLEKLAVHP LSRDLYPTSL GHYRRARDHR MSRERHDEHL LIYCSEGQGL LRVREGEAWR EYRVGSGDLL WLPPGMAHDY AADDRQPWTI FWTHLRGDSA TWLQHSAGYR DTPLRHWGLQ HALLGGFEQL LEVRHSGYRF QHFLLAASRM RSLLCQLPLL RPLREGSLDL DGLHAYMREH LHARLELERL AAFCNLSKFH FVSRYKAITG RTPIQHFLHL KIEYACQLLD SSDQSVARVG QAVGYDDSYY FSRLFSKVMG LSPSAYRQRV RQGEGGA
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