| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_17480 |
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| Symbol | rpoS |
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| ID | 4381585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1499097 |
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| End bp | 1500101 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639323954 |
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| Product | RNA polymerase sigma factor RpoS |
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| Protein accession | YP_789542 |
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| Protein GI | 116051619 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTCA AAAAAGAAGG GCCGGAGTTT GACCACGATG ATGAAGTGCT CCTCCTGGAG
CCCGGCATCA TGCTGGACGA GTCGTCTGCC GACGAGCAGC CTTCTCCCCG GGCAACTCCA
AAAGCCACCA CTTCCTTCTC TTCCAAACAA CACAAGCACA TCGACTACAC GCGCGCGTTG
GACGCAACGC AGCTGTATCT CAACGAAATC GGTTTCTCGC CCCTGTTGAC GCCCGAAGAG
GAAGTCCACT TCGCTCGTCT GGCGCAGAAG GGCGATCCCG CTGGTCGGAA GCGGATGATC
GAGAGCAACC TGCGGTTGGT GGTGAAGATC GCCCGGCGCT ATGTCAATCG CGGACTGTCC
CTGCTCGACC TGATCGAGGA AGGCAACCTA GGCCTGATCC GCGCCGTGGA GAAGTTCGAT
CCGGAGCGCG GATTCCGGTT CTCGACCTAC GCCACCTGGT GGATCCGCCA GACCATCGAA
CGGGCCATCA TGAACCAGAC CCGGACCATT CGCTTGCCGA TCCATGTGGT CAAGGAGCTC
AACGTCTACC TGCGTGCGGC GCGGGAACTG ACCCACAAGC TCGACCACGA ACCTTCACCC
GAAGAAATCG CCAACCTGCT GGAGAAGCCG GTCGCCGAGG TCAAGCGCAT GCTCGGCCTG
AACGAACGGG TGACTTCGGT AGACGTCTCT CTTGGTCCGG ACTCGGACAA GACCCTGCTG
GATACGCTCA CCGACGATCG CCCCACCGAT CCGTGCGAGC TGCTGCAGGA TGACGATCTC
AGCGAAAGCA TCGACCAGTG GCTGACGGAA CTCACCGACA AGCAGCGTGA GGTGGTGATT
CGCCGCTTCG GCTTGCGCGG GCACGAAAGC AGCACGCTGG AAGAGGTCGG TCAGGAAATC
GGCCTGACCC GCGAGCGGGT TCGTCAGATC CAGGTCGAGG CGCTGAAGCG CCTGCGGGAG
ATCCTGGAGA AGAACGGCCT GTCGAGTGAC GCGCTGTTCC AGTGA
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| Protein sequence | MALKKEGPEF DHDDEVLLLE PGIMLDESSA DEQPSPRATP KATTSFSSKQ HKHIDYTRAL
DATQLYLNEI GFSPLLTPEE EVHFARLAQK GDPAGRKRMI ESNLRLVVKI ARRYVNRGLS
LLDLIEEGNL GLIRAVEKFD PERGFRFSTY ATWWIRQTIE RAIMNQTRTI RLPIHVVKEL
NVYLRAAREL THKLDHEPSP EEIANLLEKP VAEVKRMLGL NERVTSVDVS LGPDSDKTLL
DTLTDDRPTD PCELLQDDDL SESIDQWLTE LTDKQREVVI RRFGLRGHES STLEEVGQEI
GLTRERVRQI QVEALKRLRE ILEKNGLSSD ALFQ
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