Gene PA14_17250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_17250 
Symbol 
ID4383254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1477787 
End bp1479202 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content65% 
IMG OID639323935 
Productputative amino acid permease 
Protein accessionYP_789523 
Protein GI116051638 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1115] Na+/alanine symporter 
TIGRFAM ID[TIGR00835] amino acid carrier protein 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAT TCGCCACTCA GGTCGTCGAC CTGCTCAACG GCCTTATCTG GGGCAAGATC 
CTCATCTGGC TGCTGGTCGG TTGCGGCCTG TACTTCACTG TGCGCCTGGG ATTGATCCAG
TTCCGCCACT TCGGCCATAC CTTCAGCGTG CTCAAGGGCA GCCGCCAGTC GGACGACTCG
GGAATCTCCT CGTTCCAGGC GCTCTGCACC TCTCTGGCGG CGCGGGTCGG TACCGGCAAC
GTCGCCGGCG TGGCGGTAGC GATCACGCTC GGCGGTCCCG GCGCAGTGTT CTGGATGTGG
GCGATCGCCC TGGTGGGGAT GGCGACCGGC TTCGTCGAGG CGACCCTGGC CCAGTTGTTC
AAGATTCGCG ACGACAAGGG CCAGTTCCGT GGCGGCCCGG CCTACTACAT GGAGAAGGGC
CTGGGCGCGC GCTGGATGGG CATCCTGTTC TCGATCTTCC TGATCATCGC CTTCGGTTTC
GTCTTCAACT CGGTGCAGGC CAATACCATC ACCGGTGCCA TGCAGGGCGC CTTCGGCGTG
CCGACCTGGA TCAGCGGCAT CGCCGTGGTG ATCCTCACCG CGTTGATCAT CTTCGGCGGC
CTGCGCTCCA TCGCGCGCTT CTCCGAGCTG GCGGTACCCT TCATGGCGGT GGCCTACCTG
CTGCTGGCGG TGGGCATCAT CCTGTTCAAT CTCAGCGAAC TGCCGGGCGT CCTGGAGATG
GTGGTGAAGA GTGCCTTCGG CTGGCACGAG GCCGCCGCCG GCGGCATCGG CGCGGCGATC
CTCAACGGCT TCAAGCGCGG CTTGTTCTCC AACGAAGCAG GCATGGGCTC GGCGCCCAAC
GCCGCCGCCT CGGCCACGCC CTATCCGCCG CACCCGGCGT CCCAGGGCTA CGTGCAGATG
GCCGGCGTGT TCATCGATAC CCTGCTGATC TGCACCGCTT CCGCCGCCAT CATCCTGCTG
GCCGGACCGC AGGAAGGCGA GGGCATCATG CTGGTGCAGA ATGCCCTGAC CAGCCAGGTC
GGCGACTGGG GCCGCTACTT CCTGGCGGTG ATCATCCTGT TCTTCGCCTT CACCTCGATC
GTCGCCAACT ACTTCTATGC CGAGAACTGC CTGGTATTCC TCGAGCACAA CCACCTGGCG
GGCCTGTTGA TCTTCCGCCT GATCGTGCTG GCGATGGTGA TGTTCGGCGC GCTGGCTTCG
CTGCCGTTCG TCTGGAACCT CGCCGACGTG TCGATGGGCC TGATGGCGAT CACCAACCTG
ATCGCCATCC TGCTGCTGTC CAACCTCGCG ATCAAGCTGG CCAAGGACTA CAACGCCCAG
CGCAAGGCCG GCAAGCTGCC GACCTTCGAC GCCAGCCAGT TCCCCGAAGT CCAGCAGAAG
CTCGAACCGG GTATCTGGGA CGACCGCCGC GCCTGA
 
Protein sequence
MQEFATQVVD LLNGLIWGKI LIWLLVGCGL YFTVRLGLIQ FRHFGHTFSV LKGSRQSDDS 
GISSFQALCT SLAARVGTGN VAGVAVAITL GGPGAVFWMW AIALVGMATG FVEATLAQLF
KIRDDKGQFR GGPAYYMEKG LGARWMGILF SIFLIIAFGF VFNSVQANTI TGAMQGAFGV
PTWISGIAVV ILTALIIFGG LRSIARFSEL AVPFMAVAYL LLAVGIILFN LSELPGVLEM
VVKSAFGWHE AAAGGIGAAI LNGFKRGLFS NEAGMGSAPN AAASATPYPP HPASQGYVQM
AGVFIDTLLI CTASAAIILL AGPQEGEGIM LVQNALTSQV GDWGRYFLAV IILFFAFTSI
VANYFYAENC LVFLEHNHLA GLLIFRLIVL AMVMFGALAS LPFVWNLADV SMGLMAITNL
IAILLLSNLA IKLAKDYNAQ RKAGKLPTFD ASQFPEVQQK LEPGIWDDRR A