| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_17130 |
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| Symbol | dxr |
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| ID | 4383263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1467925 |
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| End bp | 1469115 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639323926 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_789514 |
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| Protein GI | 116051647 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGAC CGCAGCGGAT CAGCGTGCTC GGCGCGACCG GCTCGATCGG CCTGAGCACC
CTGGACGTCG TCCAGCGTCA TCCCGATCGT TACGAAGCCT TCGCCCTGAC CGGCTTCAGC
CGCCTGGCCG AACTCGAGGC GCTGTGCCTC AGGCACCGCC CCGTCTATGC GGTGGTGCCG
GAGCAGGCCG CGGCGATCGC CTTGCAGGGC TCGCTCGCCG CGGCGGGTAT CCGCACCCGG
GTGCTGTTCG GCGAGCAGGC GTTGTGCGAA GTGGCCAGCG CGCCCGAAGT GGACATGGTA
ATGGCGGCCA TCGTCGGCGC CGCCGGGCTG CCGTCGACCC TGGCGGCCGT CGAGGCCGGC
AAGCGCGTAC TGCTGGCCAA CAAGGAAGCG CTGGTGATGT CCGGCGCGCT GTTCATGCAG
GCGGTCAAGC GCAGCGGCGC GGTGCTCCTG CCGATCGACA GCGAGCACAA CGCGATCTTC
CAGTCGCTGC CGCGCAATTA TGCCGATGGC CTGGAGCGGG TCGGCGTGCG CCGGATCCTC
TTGACCGCCT CCGGCGGCCC GTTCCGCGAG ACGCCGCTGG AGCAACTCGC TTCGGTGACG
CCGGAGCAGG CTTGTGCGCA CCCGAACTGG TCGATGGGGC GGAAGATTTC CGTCGATTCC
GCCAGCATGA TGAACAAGGG GCTCGAACTG ATCGAGGCGT GCTGGCTGTT CGACGCCCAG
CCGAGCCAGG TCGAGGTGGT GATCCACCCG CAGAGCGTGA TCCACTCGAT GGTGGACTAC
GTCGACGGCT CGGTGATCGC CCAGCTCGGC AATCCGGACA TGCGCACGCC GATTTCCTAT
GCCATGGCCT GGCCGGAGCG AATCGATTCC GGCGTTTCGC CGCTGGACAT GTTCGCCGTC
GGTCGCCTGG ATTTCCAGCG CCCCGACGAG CAGCGCTTCC CCTGCCTGCG CCTGGCGAGC
CAGGCCGCGG AAACCGGCGG CAGCGCCCCG GCCATGCTGA ATGCCGCGAA CGAGGTGGCC
GTGGCCGCAT TTCTCGAGCG GCGCATCCGC TTCAGCGACA TCGCGGTTAT CATCGAGGAC
GTGCTGAACC GCGAGGCGGT GACCGCAGTC GAATCGCTCG ATCAGGTCCT GGCCGCCGAT
CGCCGCGCCC GTTCGGTCGC CGGGCAATGG TTGACCCGAC ACGCCGGCTA G
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| Protein sequence | MSRPQRISVL GATGSIGLST LDVVQRHPDR YEAFALTGFS RLAELEALCL RHRPVYAVVP
EQAAAIALQG SLAAAGIRTR VLFGEQALCE VASAPEVDMV MAAIVGAAGL PSTLAAVEAG
KRVLLANKEA LVMSGALFMQ AVKRSGAVLL PIDSEHNAIF QSLPRNYADG LERVGVRRIL
LTASGGPFRE TPLEQLASVT PEQACAHPNW SMGRKISVDS ASMMNKGLEL IEACWLFDAQ
PSQVEVVIHP QSVIHSMVDY VDGSVIAQLG NPDMRTPISY AMAWPERIDS GVSPLDMFAV
GRLDFQRPDE QRFPCLRLAS QAAETGGSAP AMLNAANEVA VAAFLERRIR FSDIAVIIED
VLNREAVTAV ESLDQVLAAD RRARSVAGQW LTRHAG
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