Gene PA14_16960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_16960 
Symbol 
ID4383356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1453305 
End bp1453928 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content71% 
IMG OID639323911 
Productamino acid transporter LysE 
Protein accessionYP_789499 
Protein GI116051662 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0385936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCG CCTGGGCCCT GTTCGTACCC GCCTGCTTCG CCCTCAACCT GGCGCCGGGG 
CCGAACAACC TGCTGTCGCT GAACAACGCC GCGCGGCACG GTTTCGCCAC CGCCTCGCTG
GCCGGCGGCG GGCGCCTGCT GGCATTCGCC GGCATGCTCG CCCTGGCCGC CTCCGGGCTG
GCGCTGGTGC TGCACACCTC GGCCTGGCTG TTCCTGGCGA TCAAACTGCT CGGCGCTGCC
TACCTGTTGT GGCTTGCGGT GCAATTGTGG CGGGCCGATG CGCAGCCACT GGCGAACGAA
GCCAGCCCGG CGCGTCCCAG CCTCTGGCGC CTGGGGCGCC AGGAGTTCCT GGTGGCGGCG
GGCAACCCGA AAGCGATCCT GATCTTCACC GCCTTCCTGC CGCAGTTCGT CGATCCCGGC
CAACCGCTGG GCGCCCAGTT CGCCCAGCTC GGCGCGGCAT TCCTGCTGCT CGAATGGCTG
GCCATCGCTC TTTATTCCTA TGCCGGGCTC CACCTCGGCC GGCTGCTCGC CGGCCAGCGG
GCCCGGCGTC TGTTCAACCG CGGTTGCGCC GCGCTGCTCG GCAGCGCGGG ACTGGGCCTG
CTGCTCAGCC GCCGTCCGGC CTGA
 
Protein sequence
MSIAWALFVP ACFALNLAPG PNNLLSLNNA ARHGFATASL AGGGRLLAFA GMLALAASGL 
ALVLHTSAWL FLAIKLLGAA YLLWLAVQLW RADAQPLANE ASPARPSLWR LGRQEFLVAA
GNPKAILIFT AFLPQFVDPG QPLGAQFAQL GAAFLLLEWL AIALYSYAGL HLGRLLAGQR
ARRLFNRGCA ALLGSAGLGL LLSRRPA