Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_16960 |
Symbol | |
ID | 4383356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1453305 |
End bp | 1453928 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639323911 |
Product | amino acid transporter LysE |
Protein accession | YP_789499 |
Protein GI | 116051662 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0385936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCG CCTGGGCCCT GTTCGTACCC GCCTGCTTCG CCCTCAACCT GGCGCCGGGG CCGAACAACC TGCTGTCGCT GAACAACGCC GCGCGGCACG GTTTCGCCAC CGCCTCGCTG GCCGGCGGCG GGCGCCTGCT GGCATTCGCC GGCATGCTCG CCCTGGCCGC CTCCGGGCTG GCGCTGGTGC TGCACACCTC GGCCTGGCTG TTCCTGGCGA TCAAACTGCT CGGCGCTGCC TACCTGTTGT GGCTTGCGGT GCAATTGTGG CGGGCCGATG CGCAGCCACT GGCGAACGAA GCCAGCCCGG CGCGTCCCAG CCTCTGGCGC CTGGGGCGCC AGGAGTTCCT GGTGGCGGCG GGCAACCCGA AAGCGATCCT GATCTTCACC GCCTTCCTGC CGCAGTTCGT CGATCCCGGC CAACCGCTGG GCGCCCAGTT CGCCCAGCTC GGCGCGGCAT TCCTGCTGCT CGAATGGCTG GCCATCGCTC TTTATTCCTA TGCCGGGCTC CACCTCGGCC GGCTGCTCGC CGGCCAGCGG GCCCGGCGTC TGTTCAACCG CGGTTGCGCC GCGCTGCTCG GCAGCGCGGG ACTGGGCCTG CTGCTCAGCC GCCGTCCGGC CTGA
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Protein sequence | MSIAWALFVP ACFALNLAPG PNNLLSLNNA ARHGFATASL AGGGRLLAFA GMLALAASGL ALVLHTSAWL FLAIKLLGAA YLLWLAVQLW RADAQPLANE ASPARPSLWR LGRQEFLVAA GNPKAILIFT AFLPQFVDPG QPLGAQFAQL GAAFLLLEWL AIALYSYAGL HLGRLLAGQR ARRLFNRGCA ALLGSAGLGL LLSRRPA
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