Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_16790 |
Symbol | |
ID | 4381602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1436911 |
End bp | 1437549 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639323898 |
Product | TetR family transcriptional regulator |
Protein accession | YP_789486 |
Protein GI | 116051675 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.297454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAAC CCACCTCCTC CGTCGGTCCC GGCCGGCCCA AGGACCCGGC CAAACGGGAA GCCATTCTCG AGGCGGCCAA GCGCCTGTTC CTCTGCAACG GCTACGACGG CAGCAGCATG GAAGCCATCG CCTCGGAAGC CGGCGTTTCC AAGCTCACCG TCTACAGCCA CTTCACCGAC AAGGAAACCC TGTTCAGCGA AGCGGTGAAG GCCAAGTGCG CCGAGCAGCT TCCCGCCCTG TACTTCCAGC TGGCCGAAGG CGCGCCGCTG GAAAAGGTCC TGCTGAATAT CGCCCGCGGC TTCCACCGGC TGATCAACAG CCACGAGGCG ATCGCCCTGA CCCGCCTGAT GGCCGCGCAG GCCGGGCAGA ACCCCAAGCT TTCCGAGCTG TTCTTCGAGG CCGGGCCGAA GCAGGTGATC GACGAGATGG AACGCCTCCT CGAGCAGGCC CGCCGCAGCG GCAAGCTGGC GTTCCCGGAC GCGCGACACG CCGCCGAACA CTTCTTCATG CTGGTCAAGG GCTGCGCCAA TTACCGTCTG TTGATCGGCT GCGCCGAACC GCTGGACGAG GCCGAAGGCG AGCGGCACGT GGAAGAAGTG GTGGCGCTGT TCCTGCGCGC CTTCGCCGCG GGCGGCTGA
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Protein sequence | MSEPTSSVGP GRPKDPAKRE AILEAAKRLF LCNGYDGSSM EAIASEAGVS KLTVYSHFTD KETLFSEAVK AKCAEQLPAL YFQLAEGAPL EKVLLNIARG FHRLINSHEA IALTRLMAAQ AGQNPKLSEL FFEAGPKQVI DEMERLLEQA RRSGKLAFPD ARHAAEHFFM LVKGCANYRL LIGCAEPLDE AEGERHVEEV VALFLRAFAA GG
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