Gene PA14_16310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_16310 
Symbol 
ID4380215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1392430 
End bp1393671 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content70% 
IMG OID639323858 
Productputative MFS permease 
Protein accessionYP_789446 
Protein GI116051715 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGCC CGTCCACTCC CGCTCGTCCG CACCCCCAGG CCAGCCCGCG ATGGCTGGCA 
GTTGCCAATG TGATCTTCGC CGGCATCGCC GCCGCCCTGC ATGTCGGCAA GGCGACCATC
GCCCTGCCGT CGCTGCAACG GAGCTTCGGC GGCGACCTCG CCGCGCTGAG CTGGATCATG
TCCGCCTTTC CGTTCGTCGG CGTATTCGGC GGCATCGCCG CTGGCCTCCT GGTGCGTCGC
TGGGGAGATC GCCGGCTGCT GACCGGCGGA CTGGCGATTC TCGGCGGAGC GAGCCTGCTC
GGTGCGTCGA TGCAGGACTT CGCCTGGTTG CTCGCCACTC GCTTCGTCGA GGGGCTCGGT
TTCCTCATCG TGGTGGTGGC GGCGCCCGCC GTGTTGCACA GGATCACCAG CGAGACGCGG
CGCAGCGTGG TGTTCGGTCT GTGGAGCACC TTCATGGCAG GCGGAATCGC CCTCTCGATG
CTGTTCGGGC CGCTGCTCGC GGACTGGCGC GCCGACTGGC AACTGAGCGC ACTGCTGGTA
CTGGTCGCGG CGCTGCTGCT GCCGCTCAGC GTCCCTGCCG ACGATGGGCG CAGGGCGGCA
GGCGTGAGGC CGGCCGGTCT TGGCACGTTG CTCAAGGTTC CGGCGATCAC CCTGCTGGCG
CTCGGCTTCA CCACCTACAA CCTGCAGTTC TTCGCCCTGA TGACGTTCCT CCCCGTGTTC
CTCATGCAGC GCCTGGGTGT CGCCCTGGAG ACTGCGGGAC TCATCGGCGC GGCCATCGTC
GCGGCGAACG CCCTGGGCAA TGTCGCGGCG GGCTTCATCC TTTCCCGCGG CATACGTCCC
GGCGCCTTGC TGGCGACCAC CGCGATCCTG ATGGGAGTCA CCGGTGCGGC GTTCTTCCAT
GCCGCGACGC CGGGGCTCCT GGCGATTGCG CTGGGGTTCG TCTTCTCGGC GGTCGCCGGC
ATGCTTCCCA CCACCGTGCT GGCGACCGCG CCGCTGGCCT CGCCCACGCC TTCGCTGACG
CCACTGGCCA TCGGCTGGGT AATGCAGGGC AACTACCTGG GGCAGGTGAT CGGCCCCTTG
CTGATCGGCC TGATCGTCAG CCGTTTCGAC TGGTCGGGCG CGATCGGCCT GATGCTGGTC
GCGGGCGCGG CGGGGGCCGT CCTGGGGTTC TGCCTGCTGC GTGCGCTGGA CGGCCTGCCT
CGCGCCATTG CCACGGGTTC CGCGGCTCGC CCCGCGGATT AG
 
Protein sequence
MDSPSTPARP HPQASPRWLA VANVIFAGIA AALHVGKATI ALPSLQRSFG GDLAALSWIM 
SAFPFVGVFG GIAAGLLVRR WGDRRLLTGG LAILGGASLL GASMQDFAWL LATRFVEGLG
FLIVVVAAPA VLHRITSETR RSVVFGLWST FMAGGIALSM LFGPLLADWR ADWQLSALLV
LVAALLLPLS VPADDGRRAA GVRPAGLGTL LKVPAITLLA LGFTTYNLQF FALMTFLPVF
LMQRLGVALE TAGLIGAAIV AANALGNVAA GFILSRGIRP GALLATTAIL MGVTGAAFFH
AATPGLLAIA LGFVFSAVAG MLPTTVLATA PLASPTPSLT PLAIGWVMQG NYLGQVIGPL
LIGLIVSRFD WSGAIGLMLV AGAAGAVLGF CLLRALDGLP RAIATGSAAR PAD