Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_16310 |
Symbol | |
ID | 4380215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1392430 |
End bp | 1393671 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639323858 |
Product | putative MFS permease |
Protein accession | YP_789446 |
Protein GI | 116051715 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGCC CGTCCACTCC CGCTCGTCCG CACCCCCAGG CCAGCCCGCG ATGGCTGGCA GTTGCCAATG TGATCTTCGC CGGCATCGCC GCCGCCCTGC ATGTCGGCAA GGCGACCATC GCCCTGCCGT CGCTGCAACG GAGCTTCGGC GGCGACCTCG CCGCGCTGAG CTGGATCATG TCCGCCTTTC CGTTCGTCGG CGTATTCGGC GGCATCGCCG CTGGCCTCCT GGTGCGTCGC TGGGGAGATC GCCGGCTGCT GACCGGCGGA CTGGCGATTC TCGGCGGAGC GAGCCTGCTC GGTGCGTCGA TGCAGGACTT CGCCTGGTTG CTCGCCACTC GCTTCGTCGA GGGGCTCGGT TTCCTCATCG TGGTGGTGGC GGCGCCCGCC GTGTTGCACA GGATCACCAG CGAGACGCGG CGCAGCGTGG TGTTCGGTCT GTGGAGCACC TTCATGGCAG GCGGAATCGC CCTCTCGATG CTGTTCGGGC CGCTGCTCGC GGACTGGCGC GCCGACTGGC AACTGAGCGC ACTGCTGGTA CTGGTCGCGG CGCTGCTGCT GCCGCTCAGC GTCCCTGCCG ACGATGGGCG CAGGGCGGCA GGCGTGAGGC CGGCCGGTCT TGGCACGTTG CTCAAGGTTC CGGCGATCAC CCTGCTGGCG CTCGGCTTCA CCACCTACAA CCTGCAGTTC TTCGCCCTGA TGACGTTCCT CCCCGTGTTC CTCATGCAGC GCCTGGGTGT CGCCCTGGAG ACTGCGGGAC TCATCGGCGC GGCCATCGTC GCGGCGAACG CCCTGGGCAA TGTCGCGGCG GGCTTCATCC TTTCCCGCGG CATACGTCCC GGCGCCTTGC TGGCGACCAC CGCGATCCTG ATGGGAGTCA CCGGTGCGGC GTTCTTCCAT GCCGCGACGC CGGGGCTCCT GGCGATTGCG CTGGGGTTCG TCTTCTCGGC GGTCGCCGGC ATGCTTCCCA CCACCGTGCT GGCGACCGCG CCGCTGGCCT CGCCCACGCC TTCGCTGACG CCACTGGCCA TCGGCTGGGT AATGCAGGGC AACTACCTGG GGCAGGTGAT CGGCCCCTTG CTGATCGGCC TGATCGTCAG CCGTTTCGAC TGGTCGGGCG CGATCGGCCT GATGCTGGTC GCGGGCGCGG CGGGGGCCGT CCTGGGGTTC TGCCTGCTGC GTGCGCTGGA CGGCCTGCCT CGCGCCATTG CCACGGGTTC CGCGGCTCGC CCCGCGGATT AG
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Protein sequence | MDSPSTPARP HPQASPRWLA VANVIFAGIA AALHVGKATI ALPSLQRSFG GDLAALSWIM SAFPFVGVFG GIAAGLLVRR WGDRRLLTGG LAILGGASLL GASMQDFAWL LATRFVEGLG FLIVVVAAPA VLHRITSETR RSVVFGLWST FMAGGIALSM LFGPLLADWR ADWQLSALLV LVAALLLPLS VPADDGRRAA GVRPAGLGTL LKVPAITLLA LGFTTYNLQF FALMTFLPVF LMQRLGVALE TAGLIGAAIV AANALGNVAA GFILSRGIRP GALLATTAIL MGVTGAAFFH AATPGLLAIA LGFVFSAVAG MLPTTVLATA PLASPTPSLT PLAIGWVMQG NYLGQVIGPL LIGLIVSRFD WSGAIGLMLV AGAAGAVLGF CLLRALDGLP RAIATGSAAR PAD
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