Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_16280 |
Symbol | |
ID | 4380218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1390844 |
End bp | 1391485 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639323855 |
Product | putative transcriptional regulator |
Protein accession | YP_789443 |
Protein GI | 116051718 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.450776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGATG CGTCCCCCCG TCTGACCGAA CGCGGCAGGC AACGCCGCCG CGCCATGCTC GACGCCGCCA CCCAGGCCTT TCTCGAACAC GGTTTCGAAG GCACCACCCT GGACATGGTG ATTGAACGGG CCGGTGGTTC ACGGGGAACC CTGTACAGCT CCTTCGGCGG CAAGGAAGGC CTGTTTGCCG CGGTGATCGC CCACATGATC GAGGAAATCT TCGACGACAG CGCCGATCAG CCGCGCCCCG CCGCCACGCT GAGCGCCACC CTCGAGCATT TCGGCCGGCG CTTCCTCACC AGCCTGCTCG ATCCCCGCTG CCAGAGCCTC TATCGCCTGG TGGTGGCGGA ATCTCCGCGG TTTCCGGCGA TCGGCAAGTC CTTCTACGAG CAGGGGCCGC AGCAGAGCTA CCTGCTGCTC AGCGAGCGAC TGGTAGCGGT CGCCCCCCAC ATGGACGAGG AAACGCTCTA CGCGGTGGCC TGCCAGTTTC TCGAGATGCT CAAGGCCGAC CTGTTCCTCA AGGCCCTCAG CGTGGCCGAC TTCCAGCCGA CCATGGCACT GCTGGAAACC CGCCTCAAGC TGTCGGTGGA CATCATCGCC TGCTACCTGG AACACCTGTC GCAGCGCCCC GCGCAGGGCT GA
|
Protein sequence | MNDASPRLTE RGRQRRRAML DAATQAFLEH GFEGTTLDMV IERAGGSRGT LYSSFGGKEG LFAAVIAHMI EEIFDDSADQ PRPAATLSAT LEHFGRRFLT SLLDPRCQSL YRLVVAESPR FPAIGKSFYE QGPQQSYLLL SERLVAVAPH MDEETLYAVA CQFLEMLKAD LFLKALSVAD FQPTMALLET RLKLSVDIIA CYLEHLSQRP AQG
|
| |