Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_16040 |
Symbol | xerD |
ID | 4381624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1366492 |
End bp | 1367388 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639323837 |
Product | site-specific tyrosine recombinase XerD |
Protein accession | YP_789425 |
Protein GI | 116051736 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACCC TCGAACATCC CCTGATCGAC CGTTTCCTCG ATGCCCTGTG GCTGGAAAAA GGCCTTGCCG ACAACACCCG CGAGGCTTAT CGCAACGACC TCCAGCAGTT CAACGCCTGG CTCGATGGCC GCGGGCTGCG CCTGGAGGGC ATCGGCCGCG ACGCCATCCT CGATCACCTG GCCTGGCGCC TGGAACAGGG CTACAAGGCT CGCTCGACCG CGCGCTTCCT CTCCGGCCTG CGTGGCTTCT ACCGCTATTG CCTGCGCGAT GGCCTGATCG CCGAGGATCC CACCTTGCAG GTGGACCTGC CGCAACTGGG CAAGCCGTTG CCGAAATCCC TCTCCGAAGC GGACGTCGAG GCATTGCTGG CGGCGCCGGA AGTCGACGAC CCGCTGGGCC TGCGCGATCG CACCATGCTC GAAGTGCTGT ATGCCTGCGG CCTGCGGGTC AGCGAACTGG TCGGCCTGAC CCTGGAGCAG GTCAACCTGC GCCAGGGCGT GGTCAAGGTC TTCGGCAAGG GCAGCAAGGA GCGCCTGGTG CCGCTCGGCG AGGAAGCCAT CGGCTGGCTC GAACGCTACC TGCGCGAGGC GCGCGGCGAC CTGCTCGGCG GGCGGCCCAG CGACGTGCTG TTCCCCAGCC TGCGCGGCGA ACAGATGACC CGCCAGACCT TCTGGCATCG CATCAAGCAT CACGCGCAGG TGGCGGCGAT CGGTACGTCG ATTTCGCCGC ACACCCTGCG CCACGCCTTC GCCACCCACC TGCTCAACCA TGGCGCCGAC CTGCGGGTGG TGCAGATGCT GCTCGGCCAC AGCGACCTGT CGACCACCCA GATCTATACC CATATCGCCC GGGCCCGCCT CCAGGATCTG CACGCACGCC ACCACCCGCG AGGCTGA
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Protein sequence | MSTLEHPLID RFLDALWLEK GLADNTREAY RNDLQQFNAW LDGRGLRLEG IGRDAILDHL AWRLEQGYKA RSTARFLSGL RGFYRYCLRD GLIAEDPTLQ VDLPQLGKPL PKSLSEADVE ALLAAPEVDD PLGLRDRTML EVLYACGLRV SELVGLTLEQ VNLRQGVVKV FGKGSKERLV PLGEEAIGWL ERYLREARGD LLGGRPSDVL FPSLRGEQMT RQTFWHRIKH HAQVAAIGTS ISPHTLRHAF ATHLLNHGAD LRVVQMLLGH SDLSTTQIYT HIARARLQDL HARHHPRG
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