| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_15960 |
|---|
| Symbol | ffh |
|---|
| ID | 4381632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 1359462 |
|---|
| End bp | 1360835 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639323829 |
|---|
| Product | signal recognition particle protein Ffh |
|---|
| Protein accession | YP_789417 |
|---|
| Protein GI | 116051744 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0541] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.144741 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.536445 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAAA ACCTTACAGA CCGCCTCTCG CAGACGCTTC GCCATGTCAC CGGCAAGGCC
AAGCTGACCG AGGACAACAT CAAGGACACT CTGCGCGAAG TGCGCATGGC CCTGCTCGAG
GCCGACGTGG CCCTGCCGGT GGTCAAGGAC TTCGTCAACA AGGTCAAGGA GCGCGCCGTC
GGCACCGAGG TCTCGAAGAG CCTGACCCCG GGACAGGCGT TCGTGAAGAT CGTCCGCGCC
GAACTCGAGG AGTTGATGGG GGCGGCCAAC GAGGACCTGG CGCTGAGCGT CGCGCCGCCG
GCGGTGATCC TGATGGCCGG CCTGCAGGGC GCGGGCAAGA CCACCACCGC GGGCAAGCTG
GCGCGCTTCC TTAAGGAACG GAAGAAGAAG TCGGTGATGG TGGTTTCCGC CGACGTCTAC
CGTCCCGCCG CGATCAAGCA GCTGGAAACC CTGGCGGGCG AGGTCGGCGT AACCTTCTTC
CCTTCCGACG TCAGCCAGAA GCCGGTGGCC ATCGCCGAGG CGGCGATCCG CGAGGCGAGG
CTGAAGTTCA TCGACGTGGT GATCGTCGAT ACCGCAGGCC GCCTGCACAT CGATGCCGAC
ATGATGGACG AGATCAAGCA GGTGCACGCG GCGATCAAGC CGGCGGAAAC CCTGTTCGTG
GTCGATGCCA TGACCGGCCA GGACGCCGCC AACACCGCCA AGGCCTTCAA TGACGCCTTG
CCGCTGACCG GCGTGGTCCT GACCAAGGTC GACGGCGACG CGCGTGGCGG TGCCGCGCTC
TCGGTGCGGG CCATCACCGG CAAGCCGATC AAGTTCCTCG GCATGGGCGA AAAGAGCGAA
GCGCTCGATC CGTTCCATCC CGACCGCGTG GCCTCGCGCA TCCTCGGCAT GGGCGACGTG
CTCAGCCTGA TCGAACAGGC CGAGCAGAAC CTCGACCGCG ACAAGGCCGA GAAGCTGGCG
AAGAAGATCA AGAAGGGCAA GGGCTTCGAC CTGGAAGACT TCCGCGACCA GTTGCAACAG
ATGAAGAACA TGGGCGGCCT CGGCGGGCTC ATGGACAAGC TGCCGATGCT CGGCGGGGTC
AACCTGGCGC AGATGGGCAA TGCCCAGGGC GCTGCGGAGA AACAGTTCAA GCAGATGGAG
GCGATCATCA ACTCGATGAC GCCCGGCGAA CGGCGCGATC CGGAAATGAT CAGCGGCTCG
CGCAAGCGCC GCATCGCCCT TGGCTCCGGT ACCCAGGTGC AGGACGTTGG CCGGCTGATC
AAGCAGCACA AGCAGATGCA GAAGATGATG AAGAAGGTCA CCGCCAAGGG CGGCATGGCC
AAGATGATGC GAGGCATGGG CAGCATGTTC CCGGGGGGCA TGCCCAAGCT TTGA
|
|---|
| Protein sequence | MFENLTDRLS QTLRHVTGKA KLTEDNIKDT LREVRMALLE ADVALPVVKD FVNKVKERAV
GTEVSKSLTP GQAFVKIVRA ELEELMGAAN EDLALSVAPP AVILMAGLQG AGKTTTAGKL
ARFLKERKKK SVMVVSADVY RPAAIKQLET LAGEVGVTFF PSDVSQKPVA IAEAAIREAR
LKFIDVVIVD TAGRLHIDAD MMDEIKQVHA AIKPAETLFV VDAMTGQDAA NTAKAFNDAL
PLTGVVLTKV DGDARGGAAL SVRAITGKPI KFLGMGEKSE ALDPFHPDRV ASRILGMGDV
LSLIEQAEQN LDRDKAEKLA KKIKKGKGFD LEDFRDQLQQ MKNMGGLGGL MDKLPMLGGV
NLAQMGNAQG AAEKQFKQME AIINSMTPGE RRDPEMISGS RKRRIALGSG TQVQDVGRLI
KQHKQMQKMM KKVTAKGGMA KMMRGMGSMF PGGMPKL
|
|---|
| |