Gene PA14_15940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_15940 
Symbol 
ID4381633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1358361 
End bp1359161 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content64% 
IMG OID639323828 
Producthypothetical protein 
Protein accessionYP_789416 
Protein GI116051745 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.182655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.371616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCCC TGCTGCCCAG CCTCATCGCT GCTGTTCTCT ATCTCGGCAC CGCCGCCTAC 
CAGGGTGCCT GTGTGTCCAA GCGCACCGCG CCGGGCAAAC CCCTGCTGCT CCTGTTCGGA
CTCCTGGCAC TGGTCGCCCA CGCCTTCAGC CTCTACCAGC AATTGCTGAC CCCGGCCGGC
CTGGTGCTGG ACTTCTTCAA CGCCGCCAGC CTGATCGCCG CCGCGGTAAT CCTCCTGACC
CTGCTGGCGA CCTTGCGGAT ACCGGTGGAG AACCTGCTCC TCCTTCTATT CCCGCTGGGC
GCCCTCACCA CCCTGCTGGC GGTACTCATC CCCCACGGCA CCGTCGAGCC GATCAACGAA
CAACCAGGCA TCCTGGCCCA CATCCTGCTC TCGATCCTGG CCTACGGCCT GCTCACCATC
GCGGTGTTCC AGGCGCTCTT GCTGCTGCTC CAGGATTACC GCCTCAAGCA CAAGCATCCG
TCCGGGCTGA TCCGCAACTT CCCGCCCCTG CAAACCATGG AAAGCCTGCT GTTCGGCTTC
CTCTGGGGTG GCTGGTCGCT GCTTTCGCTG TCGCTGCTGT CCGGATGGCT GTTCGTCGAC
AACCTGTTCG CCCAGCACCT GGCGCACAAG ACCATCCTGT CCTGCTTCGC CTGGGTGGTC
TTCGCCGTGC TCCTCTGGGG TCGCCACCAG CTCGGCTGGC GGGGCCACAA GGCGATCCGC
TGGACCCTGG CCGGTTTCTG CCTGTTGATG TTGGCGTACT TCGGCAGCAA GCTGGTGCGG
GAATTCATCC TGCACATCTG A
 
Protein sequence
MHPLLPSLIA AVLYLGTAAY QGACVSKRTA PGKPLLLLFG LLALVAHAFS LYQQLLTPAG 
LVLDFFNAAS LIAAAVILLT LLATLRIPVE NLLLLLFPLG ALTTLLAVLI PHGTVEPINE
QPGILAHILL SILAYGLLTI AVFQALLLLL QDYRLKHKHP SGLIRNFPPL QTMESLLFGF
LWGGWSLLSL SLLSGWLFVD NLFAQHLAHK TILSCFAWVV FAVLLWGRHQ LGWRGHKAIR
WTLAGFCLLM LAYFGSKLVR EFILHI