Gene PA14_15830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_15830 
Symbol 
ID4381291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1349853 
End bp1350596 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content67% 
IMG OID639323818 
ProductGntR family transcriptional regulator 
Protein accessionYP_789406 
Protein GI116051755 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.800651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0246518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAG CCCACGACCT GCTCCTGGCC CTGCGTCCCG ACGAGGCGCA ACCCACCCCC 
CTCTATCTGC AGCTGGCGCG CAATCTCGAG AGCGCGATCC ATGCCGGCCA GTGGAAAGCG
GAGGAAGCGC TGCCCTCCGA ACGCAACCTC AGCGAAACCC TGAACATTTC CCGCGTCACC
GCGCGCAAGG CCCTCGAAGT ACTCTTCGAG CAGGGGCTGA TCCGCCGCAA CCAGGGCTCC
GGCACCTTCA TTACGCCGCG TCTCGAACAA CCGCTGTCGC GTCTCTCCAG CTTCAGCGAG
ATGCTCCGCC TGAAAGGCTT CACCCCCGGC TCCACCTGGC TGGAGCGCGG CATCGCCCTG
CCCACCCACG ACGAACTGAT CCGCCTCGGC CTCTCGCCGA CCGAGAAGGT CGCGCGCATG
AAGCGCCTGC GCAAGGCCGA CGGCACGGTG ATGGCGATCG AGAACAGCAC CCTGCCGGCA
CGCCTGCTGC CGGATCCGAC GGCGGTCGGC GATTCCCTCT ACGAATACCT GGACGGCATC
GGTCGCCCGG TGGTCCGCGC CCTCCAGCAC GTGCGCGCGA TCAACGCCTC CGCGTCCGAT
GCCGCGCTGG TCGGCATCGC GCCGGGCACC GCGATGCTGC TGATGACCCG GATCGGCTAC
CTCGAGGACA ACACCCCGAT AGAGCTGACC GACACCTACT GCCGCAACGA CTACTACGAC
TTCGTCGCCG AACTGCGACG CTGA
 
Protein sequence
MKTAHDLLLA LRPDEAQPTP LYLQLARNLE SAIHAGQWKA EEALPSERNL SETLNISRVT 
ARKALEVLFE QGLIRRNQGS GTFITPRLEQ PLSRLSSFSE MLRLKGFTPG STWLERGIAL
PTHDELIRLG LSPTEKVARM KRLRKADGTV MAIENSTLPA RLLPDPTAVG DSLYEYLDGI
GRPVVRALQH VRAINASASD AALVGIAPGT AMLLMTRIGY LEDNTPIELT DTYCRNDYYD
FVAELRR