Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_15540 |
Symbol | |
ID | 4381705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1314366 |
End bp | 1315988 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639323795 |
Product | putative mating pair formation protein TrbL |
Protein accession | YP_789383 |
Protein GI | 116051778 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3846] Type IV secretory pathway, TrbL components |
TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000145282 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 1.75241e-21 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAAGCAC TGCACAAGGC GGCGCTGATC GGCGTCGCGC TCGCGCTCTA CTCCACAGCC GCGTCGGCCC AGCTCACCAA CCAGGGGATG CTTGACCAAG TGGTAACGGA GTTCGCCACG CGGGCCACGG CCTGGCAGAC GGTGGTGATG AATGCCGCGA CGTTCTTGTT CTGGACGCTG GGCACGATCT CGCTGGTCAT CACCTTCGGC TTCATGGCGC TGCGCAAGGC TGACATTGGT GAGTTCTTCG CCGAGTTCAT CAGGTTCATC CTGTTCTTCG GCTTCTTCCT CTGGTTGCTG CGCAATGGGC CGAACTTTGC CAACTCGATC ATCCAGTCGC TGTCCAGGAT TGGCGAGCAG GCTTCCGGTA TCTCCTCGAT CACGCCGTCG GGCATCGTCG ATGTGGGCTT CCTGATCTGG AAGCAGGCCA TCAACAACCT GTCGGCCTGG TCGCCCATCG ACAGCTTTGT GGGCGTGGTC TTGAGCGCCG GCATCCTGCT TCTGCTGGCT GTCATCGCCG TGAACATGTT GCTGCTGCTC GTGTCAGCCT GGCTGCTGTC CTATGCCGGC ATCTTCTTCC TCGGCTTCGG CGGATCGCGT TGGACTTCCG ACATGGCGAT CAACTACTAC AAGACCGTGC TGGGCGTCGC CGTGCAGATC ATGACGATGG TGCTGCTTGT TGGCATCGGG AATGATCTGC TGTCCAGCTT CTACGCCAAG ATGAGCAAGG GCACACTGAA CTTCGAGGAG CTGGGCGTGA TGCTGGTGTT CTGCCTGGCG TTGCTGCTGC TGGTCAATCG CGTGCCGCCG CTGGTCGCCG GCGTGATTTC CGGTACGGGC GTTGGGAACG CCGGTGGCAT CGGCAACTTC GGTGCGGGCG CTGCTGTTGG TGCCGCGATG GGGGCTGCCA GTGTTGCGGC CGGCGCTGCA AGCATGGCCG GCGCTGCCGT GATGAGTGGC GCGGCCAACC TCGCCGGCGG GGCTTCGGCC GTCAAAGCCG CCTTCGAGAA GGCCCAAGGC AGCGCGACCG GCGATGCCGG CGCGGGCATG GACATGATGG CGAGCGTGGG GGGCGCGGGT GCTTCGGGCG GTCAGGACTC AGCCGGCGCA GGGGGATCGC CCTTCGCGCA GGCTGCGGGC TTCGGGGGCT CGTCGTCGGG TGGCGGCAGC AGCTCGGCCG GCTCGAAGGG GGGTGACAAG GGCGGCGCCG GCGACAAGGG CAGCAGTTCG ACCACCAGCA CCGGCGACGG TGCCGACAAG TCGGCCAAGA GTGAACCCAA GCCCTCAGCC GGCGGTGTTG GGCAGGGGCA GCAGGCCGCA CCAGGCAGCA CTGGCCGCAG TGGCCTGACT CGTGCCGCAG CATTGGCTGC GGGCACCGCC GGCGAGCTGG CGAAGGGTGC GGGTGCCGTG CTCAGGGGCA AGGCGGTGCA ACTTGCGGAG GGCTTCCACG AACGCATGGA CCAAACGATC GGCGGCCAAG TGGCAACGGC GATCCGAGCC AGCACTGCGG CAGAGGCTCC TGCCTTCGAT GGCGACAGCT TGGCCGGCGA GCAGGCCGGT AATCAGGCGG CCGATCCCGA TGATGAAGTC GCTGCTTTCG TGAATCGCAC GACGCCGGCG TGA
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Protein sequence | MKALHKAALI GVALALYSTA ASAQLTNQGM LDQVVTEFAT RATAWQTVVM NAATFLFWTL GTISLVITFG FMALRKADIG EFFAEFIRFI LFFGFFLWLL RNGPNFANSI IQSLSRIGEQ ASGISSITPS GIVDVGFLIW KQAINNLSAW SPIDSFVGVV LSAGILLLLA VIAVNMLLLL VSAWLLSYAG IFFLGFGGSR WTSDMAINYY KTVLGVAVQI MTMVLLVGIG NDLLSSFYAK MSKGTLNFEE LGVMLVFCLA LLLLVNRVPP LVAGVISGTG VGNAGGIGNF GAGAAVGAAM GAASVAAGAA SMAGAAVMSG AANLAGGASA VKAAFEKAQG SATGDAGAGM DMMASVGGAG ASGGQDSAGA GGSPFAQAAG FGGSSSGGGS SSAGSKGGDK GGAGDKGSSS TTSTGDGADK SAKSEPKPSA GGVGQGQQAA PGSTGRSGLT RAAALAAGTA GELAKGAGAV LRGKAVQLAE GFHERMDQTI GGQVATAIRA STAAEAPAFD GDSLAGEQAG NQAADPDDEV AAFVNRTTPA
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