Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_15260 |
Symbol | |
ID | 4381863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1293079 |
End bp | 1294221 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639323771 |
Product | putative acetylpolyamine aminohydrolase |
Protein accession | YP_789359 |
Protein GI | 116051799 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0390858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0000000000262427 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCCGAC GTACCGCTTT CTTCTTCGAC GAACTCTGCC TCTGGCACGC CGCCGGCCCG CACGCGCTGA CCCTGCCGGT CGGCGGCTGG GTGCAACCGC CTGCCGCCGC CGGACACGCC GAATCACCGG AAACCAAGCG CCGGCTGAAA AGCCTGCTCG ACGTGTCCGG CCTGACCGCC CGCCTGCAAC TGCGCAGCGC ACCGCCGGCG AGCGACGAGG ACCTGCTGCG CGTGCATCCG GCGCACTATC TGGAACGCTT CAAGGCGTTG AGCGACGCCG GCGGCGGCAG CCTCGGCCAG GACGCGCCGA TCGGCCCGGG CAGCTACGAG ATCGCCCGGC TCTCCGCCGG CCTGGCCATC GCCGCGCTGG ACGTGGTGCT CGCCGGCGAG GCGGACAACG CCTACTCGCT GTCGCGGCCG CCAGGTCACC ACTGCCTGCC GGACCAGGCG ATGGGCTTCT GTTTCTTCGC CAACATCGCC GTGGCCATCG AGGCGGCCAA GGCGCGCCAC GGCGTCGAGC GGGTCGCGGT GCTGGACTGG GACGTGCACC ACGGTAACGG CACCCAGGCG ATCTACTACC GGCGCGACGA CGTGTTGAGC ATTTCCCTGC ATCAGGACGG CTGCTTCCCG CCTGGCTACA GCGGCGCCGA AGACATCGGC GAGGATCGCG GTCGTGGCTT CAACCTCAAC GTGCCGCTGC TTCCCGGCGG CGGTCACGAC GCCTACATGC AGGCCATGCA ACGCATCGTG TTGCCAGCGC TGGAGCGCTT CCGCCCGCAA TTGATCGTGG TCGCCAGTGG CTTCGACGCC AACGCGGTGG ACCCGCTGGC ACGCATGCAA CTGCACAGCG ACAGCTTCCG GGCGATGACC GCGATGGTCC GCGACGCGGC CGAGCGGCAT GCCGACGGAC GCCTGGTGGT GGTCCACGAA GGCGGCTACT CGGAAGCCTA CGTGCCGTTC TGCGGGCTGG CGGTGATCGA AGAACTCAGC GGCGTGCGCA GCGCGGTGCG CGACCCGCTG CGCGACTTCA TCGAGTTGCA GCAGCCCAAC GCGGCGTTCC GCGACTTCCA GCGCCAGCGC CTCGAAGAGC TGGCCGCACA GTTCGGCCTG TGCCCGGCGC AGCCGCTTCA GGCGGCCAGG TAG
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Protein sequence | MTRRTAFFFD ELCLWHAAGP HALTLPVGGW VQPPAAAGHA ESPETKRRLK SLLDVSGLTA RLQLRSAPPA SDEDLLRVHP AHYLERFKAL SDAGGGSLGQ DAPIGPGSYE IARLSAGLAI AALDVVLAGE ADNAYSLSRP PGHHCLPDQA MGFCFFANIA VAIEAAKARH GVERVAVLDW DVHHGNGTQA IYYRRDDVLS ISLHQDGCFP PGYSGAEDIG EDRGRGFNLN VPLLPGGGHD AYMQAMQRIV LPALERFRPQ LIVVASGFDA NAVDPLARMQ LHSDSFRAMT AMVRDAAERH ADGRLVVVHE GGYSEAYVPF CGLAVIEELS GVRSAVRDPL RDFIELQQPN AAFRDFQRQR LEELAAQFGL CPAQPLQAAR
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