Gene PA14_15260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_15260 
Symbol 
ID4381863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1293079 
End bp1294221 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content70% 
IMG OID639323771 
Productputative acetylpolyamine aminohydrolase 
Protein accessionYP_789359 
Protein GI116051799 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0390858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000000000262427 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCGAC GTACCGCTTT CTTCTTCGAC GAACTCTGCC TCTGGCACGC CGCCGGCCCG 
CACGCGCTGA CCCTGCCGGT CGGCGGCTGG GTGCAACCGC CTGCCGCCGC CGGACACGCC
GAATCACCGG AAACCAAGCG CCGGCTGAAA AGCCTGCTCG ACGTGTCCGG CCTGACCGCC
CGCCTGCAAC TGCGCAGCGC ACCGCCGGCG AGCGACGAGG ACCTGCTGCG CGTGCATCCG
GCGCACTATC TGGAACGCTT CAAGGCGTTG AGCGACGCCG GCGGCGGCAG CCTCGGCCAG
GACGCGCCGA TCGGCCCGGG CAGCTACGAG ATCGCCCGGC TCTCCGCCGG CCTGGCCATC
GCCGCGCTGG ACGTGGTGCT CGCCGGCGAG GCGGACAACG CCTACTCGCT GTCGCGGCCG
CCAGGTCACC ACTGCCTGCC GGACCAGGCG ATGGGCTTCT GTTTCTTCGC CAACATCGCC
GTGGCCATCG AGGCGGCCAA GGCGCGCCAC GGCGTCGAGC GGGTCGCGGT GCTGGACTGG
GACGTGCACC ACGGTAACGG CACCCAGGCG ATCTACTACC GGCGCGACGA CGTGTTGAGC
ATTTCCCTGC ATCAGGACGG CTGCTTCCCG CCTGGCTACA GCGGCGCCGA AGACATCGGC
GAGGATCGCG GTCGTGGCTT CAACCTCAAC GTGCCGCTGC TTCCCGGCGG CGGTCACGAC
GCCTACATGC AGGCCATGCA ACGCATCGTG TTGCCAGCGC TGGAGCGCTT CCGCCCGCAA
TTGATCGTGG TCGCCAGTGG CTTCGACGCC AACGCGGTGG ACCCGCTGGC ACGCATGCAA
CTGCACAGCG ACAGCTTCCG GGCGATGACC GCGATGGTCC GCGACGCGGC CGAGCGGCAT
GCCGACGGAC GCCTGGTGGT GGTCCACGAA GGCGGCTACT CGGAAGCCTA CGTGCCGTTC
TGCGGGCTGG CGGTGATCGA AGAACTCAGC GGCGTGCGCA GCGCGGTGCG CGACCCGCTG
CGCGACTTCA TCGAGTTGCA GCAGCCCAAC GCGGCGTTCC GCGACTTCCA GCGCCAGCGC
CTCGAAGAGC TGGCCGCACA GTTCGGCCTG TGCCCGGCGC AGCCGCTTCA GGCGGCCAGG
TAG
 
Protein sequence
MTRRTAFFFD ELCLWHAAGP HALTLPVGGW VQPPAAAGHA ESPETKRRLK SLLDVSGLTA 
RLQLRSAPPA SDEDLLRVHP AHYLERFKAL SDAGGGSLGQ DAPIGPGSYE IARLSAGLAI
AALDVVLAGE ADNAYSLSRP PGHHCLPDQA MGFCFFANIA VAIEAAKARH GVERVAVLDW
DVHHGNGTQA IYYRRDDVLS ISLHQDGCFP PGYSGAEDIG EDRGRGFNLN VPLLPGGGHD
AYMQAMQRIV LPALERFRPQ LIVVASGFDA NAVDPLARMQ LHSDSFRAMT AMVRDAAERH
ADGRLVVVHE GGYSEAYVPF CGLAVIEELS GVRSAVRDPL RDFIELQQPN AAFRDFQRQR
LEELAAQFGL CPAQPLQAAR