Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_15190 |
Symbol | |
ID | 4381869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1287179 |
End bp | 1287673 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639323765 |
Product | hypothetical protein |
Protein accession | YP_789353 |
Protein GI | 116051805 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.226152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0000006863 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCGTCAT TGCTCAAGGG CATGCGCGCC GCGTTGCTGA ACCTCGCCAC GCTGCTGTTG CTGCTCGACC TGGTCCTGCT CATCTACGGC GTGTTCGCCC GCTACCTGCT CGGCAGCTCG CCGATCTGGA TGGACGAACT GGCCCGCTAC CTCATCATCG GCGCAGTAAT GCTGGCGCTC GGCGCGGTAT GGATGGAAGG CGGGCACATG CGCGTCAATC TGCTGGAACA ACGCCTGCCG CCGCGCCTGG CGCAGGTCCT CAGGCTCTAC CAGTGGCTGC TGGCGCTGGC CTTCTTCGCC TTCGCTGCCT GGGTCAGCAC CCGCTACGCG CTGAACGCCG GGCGCTTCCG CAGCCTCGGC CTGGGCGTCA GCCGCACCTG GCCGTTGCTC AGCCTGCCGC TCGGCTTCGG CCTGCTGACC CTCATGCTGT TGCTCCAGGG GCCCTGGCCG CGGCAGCCGG CCAGCACCAC CGTCGAGGGA GGGACGCAGG CATGA
|
Protein sequence | MPSLLKGMRA ALLNLATLLL LLDLVLLIYG VFARYLLGSS PIWMDELARY LIIGAVMLAL GAVWMEGGHM RVNLLEQRLP PRLAQVLRLY QWLLALAFFA FAAWVSTRYA LNAGRFRSLG LGVSRTWPLL SLPLGFGLLT LMLLLQGPWP RQPASTTVEG GTQA
|
| |