Gene PA14_15160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_15160 
Symbol 
ID4384548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1285136 
End bp1285843 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content72% 
IMG OID639323763 
Producthypothetical protein 
Protein accessionYP_789351 
Protein GI116051807 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2173] D-alanyl-D-alanine dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.803712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0000117372 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCCGGCA TCCCCATCGT CGATGCCGGC ACGCCGCTGG AGGCGCTCGG GCTGAGCCGT 
GACTTCAGCG TCTGGCCGGC CTACCACAAG CTCGGCATTC CTCACGCGAT CCCGGAGTGC
CACGCTCGCG GCGAGGTCTT CGAGCGTCTC CTGCGGGTCG CCGCCGCCCT CCCCGGCGGC
GTGCGCCTGG TGGTGCTGGA CGCCTGGCGG CCGTTCGCCG TGCAGCAGTA TCTCTACGAC
AGCCTGTCCA GCGCCCTGGC CGCGCACTAC CCACGGGCCG GCGAAGCCGA GCTGGAACGG
CTCACCCGCC AGTTCGTCTC GCCGCCGAGC AGCAGCCGCG AGGCGCCCAG CCCGCATCTC
ACCGGCGGCG CGGTGGACGT CACCCTGTGC GACGCCCAGG GCCGCTGGCT GGACATGGGC
AGCGCCTTCG ACGAAGCCGT GCCGGCCTCC TACACCGCCT ACTTCGAACG CCTGGCGGAG
CCCGACGCGC GCCAGCGACG CGTCCGCGAT CACCGTCGCC TGCTCTATCA CGCGATGCTC
GACGCCGGTT TCAGCAACCT GCCCAGCGAA TGGTGGCACT ACGATTTCGG CGACCAGCTC
TGGGCCTGGC ACACCGGCGC GACGCAGGCG CTGTTCGGCC CGGTACAGTT GCAGGCGATG
GACGCGCTCT GGCGCCAGCA GTTGCAGAAG CGCCCCCCGG CGGACTAG
 
Protein sequence
MAGIPIVDAG TPLEALGLSR DFSVWPAYHK LGIPHAIPEC HARGEVFERL LRVAAALPGG 
VRLVVLDAWR PFAVQQYLYD SLSSALAAHY PRAGEAELER LTRQFVSPPS SSREAPSPHL
TGGAVDVTLC DAQGRWLDMG SAFDEAVPAS YTAYFERLAE PDARQRRVRD HRRLLYHAML
DAGFSNLPSE WWHYDFGDQL WAWHTGATQA LFGPVQLQAM DALWRQQLQK RPPAD