Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_15160 |
Symbol | |
ID | 4384548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1285136 |
End bp | 1285843 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639323763 |
Product | hypothetical protein |
Protein accession | YP_789351 |
Protein GI | 116051807 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2173] D-alanyl-D-alanine dipeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.803712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0000117372 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCCGGCA TCCCCATCGT CGATGCCGGC ACGCCGCTGG AGGCGCTCGG GCTGAGCCGT GACTTCAGCG TCTGGCCGGC CTACCACAAG CTCGGCATTC CTCACGCGAT CCCGGAGTGC CACGCTCGCG GCGAGGTCTT CGAGCGTCTC CTGCGGGTCG CCGCCGCCCT CCCCGGCGGC GTGCGCCTGG TGGTGCTGGA CGCCTGGCGG CCGTTCGCCG TGCAGCAGTA TCTCTACGAC AGCCTGTCCA GCGCCCTGGC CGCGCACTAC CCACGGGCCG GCGAAGCCGA GCTGGAACGG CTCACCCGCC AGTTCGTCTC GCCGCCGAGC AGCAGCCGCG AGGCGCCCAG CCCGCATCTC ACCGGCGGCG CGGTGGACGT CACCCTGTGC GACGCCCAGG GCCGCTGGCT GGACATGGGC AGCGCCTTCG ACGAAGCCGT GCCGGCCTCC TACACCGCCT ACTTCGAACG CCTGGCGGAG CCCGACGCGC GCCAGCGACG CGTCCGCGAT CACCGTCGCC TGCTCTATCA CGCGATGCTC GACGCCGGTT TCAGCAACCT GCCCAGCGAA TGGTGGCACT ACGATTTCGG CGACCAGCTC TGGGCCTGGC ACACCGGCGC GACGCAGGCG CTGTTCGGCC CGGTACAGTT GCAGGCGATG GACGCGCTCT GGCGCCAGCA GTTGCAGAAG CGCCCCCCGG CGGACTAG
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Protein sequence | MAGIPIVDAG TPLEALGLSR DFSVWPAYHK LGIPHAIPEC HARGEVFERL LRVAAALPGG VRLVVLDAWR PFAVQQYLYD SLSSALAAHY PRAGEAELER LTRQFVSPPS SSREAPSPHL TGGAVDVTLC DAQGRWLDMG SAFDEAVPAS YTAYFERLAE PDARQRRVRD HRRLLYHAML DAGFSNLPSE WWHYDFGDQL WAWHTGATQA LFGPVQLQAM DALWRQQLQK RPPAD
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