Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_15150 |
Symbol | |
ID | 4384549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1284186 |
End bp | 1285139 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639323762 |
Product | putative transcriptional regulator |
Protein accession | YP_789350 |
Protein GI | 116051808 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.414846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0000298096 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCCGCC AGTCCGTGGC CGTGGTGGCC TTCGACCGCA TCAGTCCGTT CCACCTGTCG GTGCCCTGCC TGGTGTTCGG CCAGGAGTGC TACGACCCTT GCGCGCAGGC CTTCGACCTG CGTGTCTGCG CCGCCGAGCC GGGCCGGCTG CGAACCACGG TGGGGTTCAC CATCGAGGCC GAGGCCGGGC TGGAAGCGCT GGCCGAGGCG CAGACCGTGA TCGTGCCGAG CTGGCGCGAT CCACACGAGC GTCCGCCACA AGCGCTGCTG GATGCGTTGA TCGCGGCCCG TGCACGCGGT GCGCAACTGG TGGGCTTGTG CCTGGGGGCC TTCGTGCTGG CCGAGGCCGG GTTGCTCGAC GGTCGCCGCG CCACCACCCA CTGGATGTGG GCGGAGGATT TCGCTGGGCG CTTCCCTGCG GTGCGGGTGG AGCCCGACGT GCTGTACATC GAGGACGACG GCCTGCTGAC CTCGGCAGGC ACCGTCGCCG GCATCGACTG CTGTCTGCAC CTGGTCCGCC AGCGGCTCGG TGCGCAGACT ACCAATCACC TGGCCCGGCG CCTGGTGGTG GCGCCGCATC GACAGGGCGG CCAGGCCCAG TTCATCGAGC AGCCGCTGCC GGACAGTGCC CAGGACGGCC GTCTCGGCGA GCTGCTGGTG TGGCTGCGGC AGAACCTCGA CCAGGCGCAC AGCCTGGACA GCCTGGCACA GCGGGTGCTG ATGAGCCGGC GGACCTTCAC CCGGCATTTC CGCCAGCTCA CCGGCACCAC CGTCAGCCAG TGGCTGCAGG CCGAACGCCT GGCCCTGGCC CAGCGCCTGC TGGAAACCAC CGAGCATTCG GTGCAGGCGA TCGCCGGGCT GGCCGGCTTC GGTTCGGCGG TGTCGTTGCG CCAGCAGTTC TCCGCCGCGT TCGGCCTGCC GCCGCTGGGC TACCGGCGCG CCTTCGCCTC CTAG
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Protein sequence | MSRQSVAVVA FDRISPFHLS VPCLVFGQEC YDPCAQAFDL RVCAAEPGRL RTTVGFTIEA EAGLEALAEA QTVIVPSWRD PHERPPQALL DALIAARARG AQLVGLCLGA FVLAEAGLLD GRRATTHWMW AEDFAGRFPA VRVEPDVLYI EDDGLLTSAG TVAGIDCCLH LVRQRLGAQT TNHLARRLVV APHRQGGQAQ FIEQPLPDSA QDGRLGELLV WLRQNLDQAH SLDSLAQRVL MSRRTFTRHF RQLTGTTVSQ WLQAERLALA QRLLETTEHS VQAIAGLAGF GSAVSLRQQF SAAFGLPPLG YRRAFAS
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