| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_15070 |
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| Symbol | oprC |
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| ID | 4384557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1276607 |
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| End bp | 1278778 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639323754 |
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| Product | outer membrane copper receptor OprC |
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| Protein accession | YP_789342 |
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| Protein GI | 116051816 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01778] TonB-dependent copper receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0127729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAC GTATGTCTAC TCAACAACGA GCGGCCGGCA ACGCCTGCCC GACCGCCGCT
TTCAGCTTCG ACCCTGCCCG TCTCGCACAA CGCCGCCGCT GGGCGGGAGC CTTCGCCGCA
CTGTGCGGCC TGGCCCTGTC TCCGTCGGCG CTCCTGGCCG AGGAGCACTC CCAGCACCAG
GATCACGCCG TGGAGCTGGC GCCGAGCGTG GTCACCGGAG TCGCCCAGAG TTCGCCGCTG
ACCATCGTCA CCAATCCCAA GGAGCCGCGC CAACCGGTAC CGGCCAGCGA TGGGGCCGAC
TACCTGAAGA CCATTCCCGG CTTCGCGGTG ATCCGCAACG GCGGCAGCAA CGGCGACCCG
GTGCTGCGCG GGATGTTCGG TTCGCGCCTG AACATCCTCA CCAACGGCGG CATGATGCTC
GGTGCCTGTC CGAACCGGAT GGACGCGCCG ACCTCCTACA TCTCGCCGGA AACCTACGAC
AAGCTCACCG TGATCAAGGG CCCGCAGACG GTGCTCTGGG GGCCGGGCGC GTCGGCCGGG
ACGATCCTCT TCGAGCGTGA GCCGGAGCGC TTCGGCGAAC TCGGCTCGCG GGTCAACGCC
AGCCTGCTGG CCGGCTCCAA TGGCCGCTTC GACAAGGTGC TGGACGCCGC CGCCGGCAAC
CGGCTCGGCT ACCTGCGCTT CACCGGCAAC CACGCGCAGT CCGACGATTA CGAGGACGGC
GCCGGGAATA CCGTGCCGTC GCGCTGGAAG AAGTGGAACG GCGACGTCGC GGTCGGCTGG
ACCCCCGACG AGGACACCCT GATCGAACTC ACCGCCGGCA AGGGCGACGG CGAGGCACGT
TACGCCGGGC GCGGCATGGA CGGCTCGCAG TTCAAGCGCG AGAGCCTGGG CCTGCGCTTC
GTCAAATCGA ACGTCAGCGA TGTGCTGGAG AAGGTCGAGG CGCAGGTCTA CTACAACTAC
GCCGACCACA TCATGGACAA CTTCCGCCTG CGCACTCCCG ACCCGTCCAG CATGATGCCC
ATGCCGATGG CGTCCCAGGT GGACCGACGC ACCCTCGGCG GTCGCCTGGC GGCCACCTGG
CGCTGGGACG ACTTCAAGCT GGTCACCGGG GTCGACGCCA TGCGCAACGA GCACCGCGCG
CGCGGCTCCA AGTACGACAT GATGACCGAC TACTACACCG ACGCCGACCA GTTCCCCTGG
AGCAAGGACG CGGTGTTCCA CAACTACGGG GCCTTCGGCG AACTGACCTG GTTCGCCGCC
GAGCGCGACC GGCTGATCGG CGGGTTGCGC CTGGACCGCG CCTCGGTCAA GGACTACCGG
CAGACCCTGA AGTCCGGGCA CATGGGCCAC GCCATGGCCA ACCCGACGGC CAACGACACC
CGCGCCGATA CCTTGCCCAG CGGCTTCGTG CGCTACGAGC ATGACCTTGC CGACTCGCCG
ACCACCCTCT ACGCCGGCCT TGGCCATGCC GAGCGCTTCC CCGACTACTG GGAGCTGTTC
TCGCCCAAGC GCGGGCCGAA CGGGTCGGTC AACGCCTTCG ACAAGATCAA GCCGGAAAAG
ACCACCCAGC TCGACTTCGG CCTCCAGTAC AACGGCGACA AGCTGCAGGC CTGGGCCTCC
GGCTACGTCG GGGTGGTCCA GGACTTCATC CTGTTCAGCT ATCGCGAGGG CATGATGGGC
TCCTCGACCC AGGCGACCAA CGTCGACGCG CGGATCATGG GCGGCGAGCT GGGCGCTTCC
TACCAGCTCA CCGGCAACTG GAAGACCGAC GCCAGCCTGG CCTATGCCTG GGGCAAGAAC
AGCTCGGACG ACCGCGCGCT GCCGCAGATC CCGCCGCTGG AAGCGCGCTT CGGCCTGACC
TACGAGGAAG GCGACTGGAG TGCCGGCAGC CTGTGGCGGG TGGTCGCGCC GCAGAATCGT
ATCGCCAGGG ACCAGGGCAA CGTGGTCGGC AAGGACTTCG ACAAGAGCGC CGGCTTCGGC
GTCTTCTCGC TCAACGGCGC CTACCGGGTG ACTCGCAACG TCAAGCTGAG CGCCGGTGTC
GATAACCTGT TCGACAAGGA TTACACCGAG CACCTGAACA AGGCCGGCGA CGCCGGCTTC
GGTTTCTCCG CCAACGAAAC GGTTCCAGAG CCGGGCCGGA CCTTCTGGAC CAAGGTCGAC
TTCAGCTTCT GA
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| Protein sequence | MEKRMSTQQR AAGNACPTAA FSFDPARLAQ RRRWAGAFAA LCGLALSPSA LLAEEHSQHQ
DHAVELAPSV VTGVAQSSPL TIVTNPKEPR QPVPASDGAD YLKTIPGFAV IRNGGSNGDP
VLRGMFGSRL NILTNGGMML GACPNRMDAP TSYISPETYD KLTVIKGPQT VLWGPGASAG
TILFEREPER FGELGSRVNA SLLAGSNGRF DKVLDAAAGN RLGYLRFTGN HAQSDDYEDG
AGNTVPSRWK KWNGDVAVGW TPDEDTLIEL TAGKGDGEAR YAGRGMDGSQ FKRESLGLRF
VKSNVSDVLE KVEAQVYYNY ADHIMDNFRL RTPDPSSMMP MPMASQVDRR TLGGRLAATW
RWDDFKLVTG VDAMRNEHRA RGSKYDMMTD YYTDADQFPW SKDAVFHNYG AFGELTWFAA
ERDRLIGGLR LDRASVKDYR QTLKSGHMGH AMANPTANDT RADTLPSGFV RYEHDLADSP
TTLYAGLGHA ERFPDYWELF SPKRGPNGSV NAFDKIKPEK TTQLDFGLQY NGDKLQAWAS
GYVGVVQDFI LFSYREGMMG SSTQATNVDA RIMGGELGAS YQLTGNWKTD ASLAYAWGKN
SSDDRALPQI PPLEARFGLT YEEGDWSAGS LWRVVAPQNR IARDQGNVVG KDFDKSAGFG
VFSLNGAYRV TRNVKLSAGV DNLFDKDYTE HLNKAGDAGF GFSANETVPE PGRTFWTKVD
FSF
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