| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_14650 |
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| Symbol | secF |
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| ID | 4381890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1249418 |
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| End bp | 1250338 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639323724 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_789312 |
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| Protein GI | 116051845 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATATCA AGATCGGTAC CATCAACTTC ATGGGCATCC GCAACATCGC GTTTGCCGTC
ACCCTGATCC TGACCGTCAT CGCCCTGGGC AGCTGGTTCA CCAAGGGCAT CAACTTCGGC
CTCGACTTCA CCGGCGGTAC GCTGATCGAG CTGACCTACG AACAACCGGC CGATCTCGGC
AAGGTGCGTG GTCAACTGGT CGGCGCCGGC TACGAGGACG CTGTGGTGCA GAGCTTCGGC
GACGCCCGCG ACGTGCTGGT GCGGATGCCC AGCGAGGACC CGGAACTGGG CAAGAAGGTC
GCTACCGCCT TGCAGCAGGC CGATACCGGC AACCCGGCGA ACCTGAAGCG GGTCGAGTAC
GTCGGCCCGC AGGTGGGTGA AGAACTGCGC GACCAGGGCG GCCTCGGCAT GCTCCTGGCG
CTGGGCGGCA TCCTGCTGTA CGTCGGCTTC CGCTTCCAGT GGAAGTTCGC CCTCGGGGCG
ATCCTCTCGC TGGTGCACGA TGCGATCATC GTGATGGGCG TGCTGTCGTT CTTCCAGGTG
ACCTTCGACC TGACCGTCCT CGCCGCGGTG CTGGCGGTGG TCGGTTACTC GCTGAACGAC
ACCATCGTGA TCTTCGACCG GGTGCGCGAG AACTTCCGCG TGCTGCGCAA GGCCAGTCTG
ATCGAGAACC TGAACATCTC CACCAGCCAG ACCCTGTTGC GCACCATCGC CACCTCGGTC
TCCACGCTGC TGGCCATCGC CGCGCTGCTG TTCTTCGGCG GCGACAACCT GTTCGGTTTC
TCCATCGCCC TGTTCGTCGG TGTAATGGCG GGTACCTACT CGTCGATCTA CATCGCCAAC
GTGGTCTTGA TCTGGCTGAA CCTGACCAGC GAGGACCTGA TCCCGCCGCA GGCCAAGGAC
ACCGTCGACG ATCGCCCCTG A
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| Protein sequence | MNIKIGTINF MGIRNIAFAV TLILTVIALG SWFTKGINFG LDFTGGTLIE LTYEQPADLG
KVRGQLVGAG YEDAVVQSFG DARDVLVRMP SEDPELGKKV ATALQQADTG NPANLKRVEY
VGPQVGEELR DQGGLGMLLA LGGILLYVGF RFQWKFALGA ILSLVHDAII VMGVLSFFQV
TFDLTVLAAV LAVVGYSLND TIVIFDRVRE NFRVLRKASL IENLNISTSQ TLLRTIATSV
STLLAIAALL FFGGDNLFGF SIALFVGVMA GTYSSIYIAN VVLIWLNLTS EDLIPPQAKD
TVDDRP
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