Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_14460 |
Symbol | holC |
ID | 4381905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1234934 |
End bp | 1235362 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639323708 |
Product | DNA polymerase III subunit chi |
Protein accession | YP_789297 |
Protein GI | 116051860 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2927] DNA polymerase III, chi subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCCGGG TCGATTTCTA CGTGATCCCC AGCGCCGATC CGTCGGCGCG CCTGCAGGTC GCCTGCCGCC TGGCCGAGAA GGCCTGGCGG CAGGGCATGC GGGTCTACCT GCATTGCGCC GACGAGGCGC AGCGCAGCGA GTTGGACGGC CGCCTGTGGA GCTTCCGCGG CGAGGCTTTC ATTCCTCACA GCCTGGCCGA GGAAGACGCC GAGGCGCCCG TCGCCCTGGG TCTGGGAGAG ACCCCGGGGA ACCATCGCGA CCTGCTGATC AACCTGACCC TCGAAGCCCC CGGCTTCGTC GCGAACTTTT CGCGGGTGGC CGAACTGGTG GTCGAGGAGC CGGCGATCCG CCAGGCGGCA CGGGATAAAT TCCGCTTCTA CCGGGAGCAG GGCTATCCTC TACAGGATCA TCGCCTGCCG CGTATCTGA
|
Protein sequence | MTRVDFYVIP SADPSARLQV ACRLAEKAWR QGMRVYLHCA DEAQRSELDG RLWSFRGEAF IPHSLAEEDA EAPVALGLGE TPGNHRDLLI NLTLEAPGFV ANFSRVAELV VEEPAIRQAA RDKFRFYREQ GYPLQDHRLP RI
|
| |