Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_14060 |
Symbol | |
ID | 4385348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1204817 |
End bp | 1206715 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639323677 |
Product | AMP-binding domain protein |
Protein accession | YP_789266 |
Protein GI | 116051891 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0382905 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCCGT CCCCATCGAT CGCCGGGCTG AGCGATATCG AAGCCCTGGA ACGCGTGCCG CTGGAACAGC GCGACCTGCC ATCCAGCACC TACGAACTGT TGCAACGCTC GGCCCAGCGC CACGGCCAGC GTATCGCCCT GAGCTGCCTG CTGCATGGCA GCGCTGCCGA AGAACCGTTG CGGATCAGCT ATGCCGAGCT GTTCGCCCGC GTCACCCAGA CCGCCAACGC CTTGCACCGG CTGGGCCTGG AAAGCCACCA GGCGGTGTCC TTCCTGCTGC CCAACCTGCC GCAGACCCAC TACGTGATCT GGGGCGGCGA AGCTGCCGGG ATCGTCAATG CGATCAACCC GCTGCTCGAG CCGGAGCACA TCGCCGAGCT GATCCGCGCC TCCAACACCC GGGTGCTGGT GACCCTGGCG CCGTTCCCCG GCACCGACCT GTGGCAGAAG GTCGCCGGCC TGCGCGCGCA GCTGCCGGAG CTGTACGCGA TCGTCGTGGT CGATCCGGCC AACCTGTTGC CGGCGCCGCA GCGCGAGGCG CTCAAGGCCC AGCGCGGGCC GCTGCCGGAG GGCGTGCTGG ACTTCGATAC GCTGATCGCC GACTGCCCGG CAGACCGCCT GGAGAGCGGA CGGGCGATCC ATCCGGACGA CGTCGCTTCC TATTTCCATA CCGGCGGCAC CACCGGCACG CCGAAGCTGG CGCCGCACAG CCACTTCAAC GAGGTGGCGA TGGCCGAGAT CATGGGCCTG AACGCCGACT ACGGGGTGGA CGACGTGCTG CTCTGCGGCC TGCCGCTGTT CCACGTCAAC GGCGTGATGG TTACCGGCCT GGCGCCCTTC CATCGCGGCG CCCAGGTGCT CCTGGCCGGG CCCCAGGGCT ACCGCAATCC GACCCTGATC CAGGACTTCT GGAAGCTGGT GGAGCGCTAC CGGGTCACCA GCTTCAGTGG CGTGCCGACC ATCTACGCGG CGTTGCTGCA GGTCCCCAGC GATGGCCGCG ACCTGTCCAG CCTGCGTTTC GCCCTGTGCG GCGCGGCGCC GATGCCGGTG GAGCTGATCC GCCAGTTCGA GGCGCGTACC GGGCTCAAGG TGATCGAAGG CTACGGCCTC ACCGAAGGTA CCTGCGGCAC CAGTTGCAAC CCGCGTGGCG GCGAGCGCCG GCCGGGTTCG ATCGGCCTGC GCCTGCCGTA CTGCCAGGTG AAGGTCGCGG TGCTCGACGG CGAGGGCAAT TACCTGCGCG ATGCCGCGCC GAACGAGGTG GGCAACCTCT GCCTGAAGGG CCCGACGGTG TTCAAGGGCT ACCTGCAACA GGACCGGAAC CGCGATATCT GGGTCGGCGA TGGCTGGTTC AATACCGGCG ACCTCGGTCG TATCGACGAG GACGGCTACA TCTGGCTCAC CGGGCGCAGC AAGGACCTGA TCATTCGCGG TGGCCACAAC ATCGACCCAC AGATGATCGA AGAAGCGCTG CACCGGCATC CGGCCGTGGC CCTGGCGGCG GCGGTGGGCA AGCCGGACGC CAAGGCCGGC GAGCTGCCGG TGGTGTATAT CCAGCTCAAG CCCGGCGCCA GCGCCAGCGA GGAAGAGCTG CTGGAACACG CCAGCCGCCA CGTACCGGAG CGCGCGGCGG TGCCCAAGGA TGTCTGGCTG ATCGAGAGCA TGCCGGTCAC CGCGGTGGGC AAGACCTTCA AGCCGGCGCT GCGCCTGGAC GCGATCCGCC GGGTGCTGGA GGAGGAAAGC CGGAGGATCG CCGAGGATAT CCGCGTGGAG GTGGTCGCCG ACGAGCGCCA CGGCCAGCTC GCCCACCTGC ACGTTCCCGC GCTCGACGAA AGACGCCGGG CGGCGCTGGA AGAGCTGCTC GGCGGCTACG CGCTGAACTA CCGGCTGCAC GCCGTCTGA
|
Protein sequence | MNPSPSIAGL SDIEALERVP LEQRDLPSST YELLQRSAQR HGQRIALSCL LHGSAAEEPL RISYAELFAR VTQTANALHR LGLESHQAVS FLLPNLPQTH YVIWGGEAAG IVNAINPLLE PEHIAELIRA SNTRVLVTLA PFPGTDLWQK VAGLRAQLPE LYAIVVVDPA NLLPAPQREA LKAQRGPLPE GVLDFDTLIA DCPADRLESG RAIHPDDVAS YFHTGGTTGT PKLAPHSHFN EVAMAEIMGL NADYGVDDVL LCGLPLFHVN GVMVTGLAPF HRGAQVLLAG PQGYRNPTLI QDFWKLVERY RVTSFSGVPT IYAALLQVPS DGRDLSSLRF ALCGAAPMPV ELIRQFEART GLKVIEGYGL TEGTCGTSCN PRGGERRPGS IGLRLPYCQV KVAVLDGEGN YLRDAAPNEV GNLCLKGPTV FKGYLQQDRN RDIWVGDGWF NTGDLGRIDE DGYIWLTGRS KDLIIRGGHN IDPQMIEEAL HRHPAVALAA AVGKPDAKAG ELPVVYIQLK PGASASEEEL LEHASRHVPE RAAVPKDVWL IESMPVTAVG KTFKPALRLD AIRRVLEEES RRIAEDIRVE VVADERHGQL AHLHVPALDE RRRAALEELL GGYALNYRLH AV
|
| |