| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_13990 |
|---|
| Symbol | |
|---|
| ID | 4385353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 1199242 |
|---|
| End bp | 1200033 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639323672 |
|---|
| Product | putative amino acid ABC transporter |
|---|
| Protein accession | YP_789261 |
|---|
| Protein GI | 116051896 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.258104 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.0183711 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGT CGCTGAACAC CAAGAACCTG CTGGGAGGCC TGCTGCTCGG CGTGCTCGCC
AGCGGATCCG CCGTCGCCGC CGATGGCAAC CTGCGGATCG GCATCGAGGC CGCCTACCCG
CCGTTTTCCT TCAAGACCGC CGAAGGCGAA CTGGCCGGCT TCGACTACGA CATCGGCAAC
GCACTGTGCG CGCAGATGCA GGTGAAGTGC CAGTGGATCG AGCAGGAGTA CGACGGCCTG
ATTCCCTCGC TGAAAGTTCG CAAGATAGAC GCCGCGCTGT CCTCCATCAC CATCACCGAG
GAGCGCCGGC GCTCGGTGGA CTTCACCCAC AAGTACTACT TCACGCCGGG CCGCCTGGTG
ATGAAGGAAG GCGCCCAGCT CGACGACAGC TTCAGCCAGT TGGCCGGCAA GCGCATCGGC
GTGCAGCGCG GCGCTACCGC CGACCGCTTC GCCAGTGCGG TGCTGGCCAA GGCCGGTGCC
GAAGTGGTGC GCTACACCAG CCAGGACGAG ATCTACCTGG ACCTGGTGGC CGGCCGCCTC
GACGCCACCT TCGCCGACTC CATCCCGTTG CAGACCGGCT TCCTCGATAC CCCGCGCGGC
AAGGGCTACG CCTTCGTCGG GCCGGAGTTC AAGGACCCGA AATACTTCGG CGAGGGCGCT
GGGATCGCGG TGCGCAAGGG GGACGCCGAG CTGGTCGGCA AGCTCAACGC GGCGATCGAC
GCGATTCGTG CCGACGGGAC CTACAAGCGC ATCGAGGGCA AGTACTTCAA GAGCGACATC
TACGGCGACT GA
|
|---|
| Protein sequence | MIKSLNTKNL LGGLLLGVLA SGSAVAADGN LRIGIEAAYP PFSFKTAEGE LAGFDYDIGN
ALCAQMQVKC QWIEQEYDGL IPSLKVRKID AALSSITITE ERRRSVDFTH KYYFTPGRLV
MKEGAQLDDS FSQLAGKRIG VQRGATADRF ASAVLAKAGA EVVRYTSQDE IYLDLVAGRL
DATFADSIPL QTGFLDTPRG KGYAFVGPEF KDPKYFGEGA GIAVRKGDAE LVGKLNAAID
AIRADGTYKR IEGKYFKSDI YGD
|
|---|
| |