| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_13800 |
|---|
| Symbol | narH |
|---|
| ID | 4381918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 1187404 |
|---|
| End bp | 1188945 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639323658 |
|---|
| Product | respiratory nitrate reductase beta subuni |
|---|
| Protein accession | YP_789247 |
|---|
| Protein GI | 116051910 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1140] Nitrate reductase beta subunit |
|---|
| TIGRFAM ID | [TIGR01660] nitrate reductase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.104283 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTC GTTCGCAAGT CGGCATGGTG CTGAACCTCG ACAAGTGCAT TGGTTGCCAC
ACCTGCTCGA TCACCTGCAA GAACGTCTGG ACCAGCCGCG AAGGCATGGA GTACGCCTGG
TTCAACAACG TCGAGACCAA GCCCGGGATC GGCTACCCGA AGGAATGGGA AAACCAGGAG
AAGTGGAAGG GCGGCTGGGT GCGCGCGGCG GACGGTTCGA TCCGCCCGCG CATCGGCGGC
AAGTTCCGCG TGCTGGCGAA CATCTTCGCC AACCCGGACC TGCCCGAGAT CGACGACTAC
TACGAACCGT TCGACTTCGA TTACCAGCAC CTGCATACCG CGCCCAAGGC CGAGCACCAG
CCGGTGGCGC GCCCGCGCTC GCTGGTCTCC GGGCAGCGCA TGGAGAAGAT CGAGTGGGGC
CCGAACTGGG AGGAGATCCT CGGCACCGAG TTCGCCAAGC GGCGCAAGGA CAAGAACTTC
GACCAGGTCC AGGCGGACAT CTACGGTGAG TACGAGAACA CCTTCATGAT GTACCTGCCG
CGCCTCTGCG AGCACTGCCT GAACCCGGCG TGCGTGGCGT CCTGCCCGAG CGGGGCGATC
TACAAGCGCG AGGAGGACGG CATCGTCCTG ATCGACCAGG ACAAGTGCCG CGGCTGGCGG
ATGTGCATCT CCGGCTGCCC GTACAAGAAG ATCTACTTCA ACTGGAAGAG CGGCAAGTCC
GAGAAGTGCA TCTTCTGCTA CCCGCGCATC GAGGCCGGCC AGCCCACTGT CTGCTCGGAG
ACCTGCGTCG GGCGCATCCG CTACCTCGGC GTGCTGCTCT ACGACGCCGA CCGCATCCAC
GAAGTGGCCA GTTGCGAGAA CGAGCGCGAG CTGTACGAGA AGCAACTGGA GATCTTCCTC
GATCCGTTCG ACCCGGCGGT GATCGCCCAG GCGCGCAAGG ACGGGGTGGC CGACAGCGTC
ATCGAGGCGG CGCAGAAGTC GCCGGTGTAC AAGCTGGCGA TGGACTGGAA GCTGGCCCTG
CCGCTGCACC CGGAATACCG CACGCTGCCG ATGGTCTGGT ACGTGCCACC GCTGTCGCCG
ATCCAGAACG CCGCCGCCGA GGGGCACATC GGCAGCGACG GGGTGATCCC GGACGTGGAG
TCGCTGCGCA TCCCCGTGCA GTACCTGGCC AACCTGCTCA CCGCCGGCGA CACCGCGCCG
GTGCTGCTGG CGCTCAAGCG CCTGCTGGCG ATGCGCGCCT ACAAGCGCGC CGAGCACGTC
GAAGGCCGCC AGGACCTGGA GGTGCTGGCC AAGGTCGGGT TGAGCGTGGA GCAGGTGGAG
GAGATGTACC GCTACCTGGC CATCGCCAAC TACGAGGATC GCTTCGTGAT CCCCAGCGCG
CACCGCGAGG AAGCGCTTTC CGATGCCTTC GCCGAGCGTT CCGGCTGCGG CTTCAGCTTC
GGCAACGGCT GTTCCGGCGG CAGCAACTCC GCCGTCAACC TGTTCGGCGG CAAGCCGACC
AACCGCCGCG ACGTGATCCA GGTCGTGCAG ATCCAGGAGT GA
|
|---|
| Protein sequence | MKIRSQVGMV LNLDKCIGCH TCSITCKNVW TSREGMEYAW FNNVETKPGI GYPKEWENQE
KWKGGWVRAA DGSIRPRIGG KFRVLANIFA NPDLPEIDDY YEPFDFDYQH LHTAPKAEHQ
PVARPRSLVS GQRMEKIEWG PNWEEILGTE FAKRRKDKNF DQVQADIYGE YENTFMMYLP
RLCEHCLNPA CVASCPSGAI YKREEDGIVL IDQDKCRGWR MCISGCPYKK IYFNWKSGKS
EKCIFCYPRI EAGQPTVCSE TCVGRIRYLG VLLYDADRIH EVASCENERE LYEKQLEIFL
DPFDPAVIAQ ARKDGVADSV IEAAQKSPVY KLAMDWKLAL PLHPEYRTLP MVWYVPPLSP
IQNAAAEGHI GSDGVIPDVE SLRIPVQYLA NLLTAGDTAP VLLALKRLLA MRAYKRAEHV
EGRQDLEVLA KVGLSVEQVE EMYRYLAIAN YEDRFVIPSA HREEALSDAF AERSGCGFSF
GNGCSGGSNS AVNLFGGKPT NRRDVIQVVQ IQE
|
|---|
| |