Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_13740 |
Symbol | narX |
ID | 4381922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1178774 |
End bp | 1180642 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639323654 |
Product | two-component sensor NarX |
Protein accession | YP_789243 |
Protein GI | 116051914 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.869934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.455278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGG CGACCGCGCC GGACGCTGAC CAGCGGGACA GATTCTTTGG AGGTAGTGAC AGGGCCGGAA AGCCGATCCT GCGCCGCTCC CTGGTAGTCC GCTTCGGCTG CTACCTCACC CTGCTGGTAT CGCTGGCGCT GATCGGGATG TTCAGCGCCC TGCTCTTCGC CGACTACACG CACCAGGACG CCGCGGTGAT CAACCACGCC GGCTCGTTGC GCATGCTCAC CTACCGGGTC GCCCTGGAGC CCAGCCTGGA AGGCCGCCAG GCGCTGCTCG GGACCCTCGG CGAACGCCTC GACAGCGGCG ACATCCGCCG CCTGCTGCAA CGCCAGGACG CCGACGACCC GATCCGCCAG CTGCACCAGG AGCTGCGCGA GGGCCTGGCG CGCCTGGACC CGCGCGCGCT GCCCGGACGC GCCGTGCTGG ACGCCTACGT CGGCGACATC GACCGTTTCG TCGGCATCCT CCAGGCCAAG GCCGAGCGCC GCTCGCAACT GCTCAGCACG GTGCAGGGCC TGTGCCTGTT CCTCAGCCTG CTGGTGGTGT TCGTCACCCT CTACGACCTC AGCTACCACG TCATCGGCCC GCTGCGCGAA CTCACCAGCA CCGCCCGCCG CCTGGGCCGC GGCGAGCTGG ACGCGCGGGT CACCTACAGC GGCGAGGACG AACTGGCGCA ACTGGGCGAG CGCTTCAACC AGATGGCCGG CGAGCTGAAG AGCATCTACG GCGACCTGGA AGAGCGCGTG GAGGACAAGA CCCGCGCCCT CTCGCAGAGC CACCAGCGCC TCGAACTGCT CTACGCCAGT GCCCGCCGGC TGGGCGAGAA CCCCTACGAC AGCCGCACCC TGCAACCGCT GCTGAACCAG TTGGAGAAAG TGCTAGACGC CGGCCGCGTG ACCCTCTGCC TGAACAAGGA CGGGGTCGAG CGCGCCTACA GTTCGCTGAC CACCACCGAG CGCCCGGCGG ACTTCTGCCT GCAGGGCGAC TGCGGTAGCT GCCGCGAGCA GGCCAGCGCC TGCGACCAAC CCTCGTCCCT GGCCCAGCCA TTGCTGATGC AGCCCCTGTC CATCGCCGGC CACCGTTTCG GCGAACTGTT CATCGAAAGC CGCAGCGGCC GCCTGGAGAA CTGGCAGCAG CAACTGATCG AGACCTTCTG CGACAACATC GCCCGCACCT TCGCCCTGTC CCTGCAACAG GAACAGGAAA GCCGCCTGGC CCTGTTCGCC GAGCGCGGCA CCATCGCCCG TGAACTGCAC GACTCGCTGG CACAGTCGCT GTCCTACCTG AAGATCCAGG TCAGCCGCCT GGGCACCCTG CTCAAGCGCG AGGCGCCGGC GGAGAAGATC GAGGACACCC TCGACGAACT GCGCGAAGGC CTCAACGGCG CCTACCGGCA ACTGCGCGAA CTGCTCACCA CCTTCCGCCT CAGCCTCGAC GAGCCGAGCC TGGAAGCCGC GCTGGGGAAC GCCGTGGCCG AGTTCGGCGA GCGCGGCGAG GTGGCGATCG AACTGGACAA CCGCCTGCAA CACGTGCCGC TGAGCCCCAA CGAGGAAATC CACGTCCTGC AGATCGTCCG CGAGGCGCTC TCCAACGTGG TTCGCCATTC GCAGGCGCAA CGGGCCTGGG TGCGCCTGAG CAGCCAGGCC GACGGCCAGG TGAGCATCGC CGTAGAGGAC GATGGCGTCG GCTTTGATCC GCAGCAGAAC CGCAGCGGCC ACTATGGGCT TACCATCATG CAGGAGCGCG GCCAGACCCT CGGCAGCCAG TTGCGCTTCG AAGCGCGCGC GCCCCACGGC ACGCGAGTGC TCTTCAGCTT CGTGCCGACC GCCCTGCAAC CCTCCGCCGC CAAGGAGCCG ACCCCATGA
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Protein sequence | MNKATAPDAD QRDRFFGGSD RAGKPILRRS LVVRFGCYLT LLVSLALIGM FSALLFADYT HQDAAVINHA GSLRMLTYRV ALEPSLEGRQ ALLGTLGERL DSGDIRRLLQ RQDADDPIRQ LHQELREGLA RLDPRALPGR AVLDAYVGDI DRFVGILQAK AERRSQLLST VQGLCLFLSL LVVFVTLYDL SYHVIGPLRE LTSTARRLGR GELDARVTYS GEDELAQLGE RFNQMAGELK SIYGDLEERV EDKTRALSQS HQRLELLYAS ARRLGENPYD SRTLQPLLNQ LEKVLDAGRV TLCLNKDGVE RAYSSLTTTE RPADFCLQGD CGSCREQASA CDQPSSLAQP LLMQPLSIAG HRFGELFIES RSGRLENWQQ QLIETFCDNI ARTFALSLQQ EQESRLALFA ERGTIARELH DSLAQSLSYL KIQVSRLGTL LKREAPAEKI EDTLDELREG LNGAYRQLRE LLTTFRLSLD EPSLEAALGN AVAEFGERGE VAIELDNRLQ HVPLSPNEEI HVLQIVREAL SNVVRHSQAQ RAWVRLSSQA DGQVSIAVED DGVGFDPQQN RSGHYGLTIM QERGQTLGSQ LRFEARAPHG TRVLFSFVPT ALQPSAAKEP TP
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