Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_13680 |
Symbol | |
ID | 4381927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1175325 |
End bp | 1176155 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639323649 |
Product | short chain dehydrogenase |
Protein accession | YP_789238 |
Protein GI | 116051919 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.995121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAC CCGTCGCCTT CGTCACCGGC TGCTCCAGCG GCATCGGCCG CGCCCTCGCC GACGCCTTCC AGCGCGCCGG CTACCGGGTC TGGGCCAGCG CACGCAAGGA AGACGACGTG CGCGCCCTGG CCGAGGCCGG CTTCCAGGCG GTGCAACTGG ACGTCAACGA CGCCGCCGCG CTGGCCCGTC TGGCCGAGGA GCTGGAAGTC GAAACCGCCG GCCTCGACGT GCTGGTCAAC AACGCCGGCT ACGGCGCCAT GGGTCCGCTG CTGGACGGCG GCGTCGACGC CATGCGCCGG CAGTTCGAGA CCAACGTGTT CGCCGTGGTC GGCGTGACCC GCGCACTGTT CCCGCTACTG AGGCGCAAGT CCGGCCTGGT GGTGAACGTC GGCAGCGTCT CCGGCGTGCT GGTCACGCCC TTCGCCGGCG CCTACTGCGC CTCCAAGGCC GCGGTGCATG CGCTGAGCGA TGCCCTGCGC CTGGAACTAG CACCGTTCGG CGTCGAGGTG CTGGAAGTGC AGCCGGGCGC CATCGCCTCG AACTTCGGCG CCAGCGCCAG CCGCGAGATG GACAGCGTGG TCGACGAACG CTCGCCCTGG TGGCCGTTGC GCCGGCAGAT CCAGGCGCGC GCCGCGGCAT CCCAGGACAA TCCCACGCCC GCCGAAGACT TCGCCCGCCA GTTGCTCGCC GCCGTGCAGC GCCGTCCGCG CCCGCCGCTG GTGCGCATCG GCAATGGCAG CCGGGCCCTG CCGGCGCTGG CCCGCTGGAT GCCGCGCGGC CTGCTGGAGC GGCTGCTGAA GAAGCGCTTC GGCCTCGACA CGCGCCTCTG A
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Protein sequence | MSQPVAFVTG CSSGIGRALA DAFQRAGYRV WASARKEDDV RALAEAGFQA VQLDVNDAAA LARLAEELEV ETAGLDVLVN NAGYGAMGPL LDGGVDAMRR QFETNVFAVV GVTRALFPLL RRKSGLVVNV GSVSGVLVTP FAGAYCASKA AVHALSDALR LELAPFGVEV LEVQPGAIAS NFGASASREM DSVVDERSPW WPLRRQIQAR AAASQDNPTP AEDFARQLLA AVQRRPRPPL VRIGNGSRAL PALARWMPRG LLERLLKKRF GLDTRL
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