Gene PA14_13680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_13680 
Symbol 
ID4381927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1175325 
End bp1176155 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content73% 
IMG OID639323649 
Productshort chain dehydrogenase 
Protein accessionYP_789238 
Protein GI116051919 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.995121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAC CCGTCGCCTT CGTCACCGGC TGCTCCAGCG GCATCGGCCG CGCCCTCGCC 
GACGCCTTCC AGCGCGCCGG CTACCGGGTC TGGGCCAGCG CACGCAAGGA AGACGACGTG
CGCGCCCTGG CCGAGGCCGG CTTCCAGGCG GTGCAACTGG ACGTCAACGA CGCCGCCGCG
CTGGCCCGTC TGGCCGAGGA GCTGGAAGTC GAAACCGCCG GCCTCGACGT GCTGGTCAAC
AACGCCGGCT ACGGCGCCAT GGGTCCGCTG CTGGACGGCG GCGTCGACGC CATGCGCCGG
CAGTTCGAGA CCAACGTGTT CGCCGTGGTC GGCGTGACCC GCGCACTGTT CCCGCTACTG
AGGCGCAAGT CCGGCCTGGT GGTGAACGTC GGCAGCGTCT CCGGCGTGCT GGTCACGCCC
TTCGCCGGCG CCTACTGCGC CTCCAAGGCC GCGGTGCATG CGCTGAGCGA TGCCCTGCGC
CTGGAACTAG CACCGTTCGG CGTCGAGGTG CTGGAAGTGC AGCCGGGCGC CATCGCCTCG
AACTTCGGCG CCAGCGCCAG CCGCGAGATG GACAGCGTGG TCGACGAACG CTCGCCCTGG
TGGCCGTTGC GCCGGCAGAT CCAGGCGCGC GCCGCGGCAT CCCAGGACAA TCCCACGCCC
GCCGAAGACT TCGCCCGCCA GTTGCTCGCC GCCGTGCAGC GCCGTCCGCG CCCGCCGCTG
GTGCGCATCG GCAATGGCAG CCGGGCCCTG CCGGCGCTGG CCCGCTGGAT GCCGCGCGGC
CTGCTGGAGC GGCTGCTGAA GAAGCGCTTC GGCCTCGACA CGCGCCTCTG A
 
Protein sequence
MSQPVAFVTG CSSGIGRALA DAFQRAGYRV WASARKEDDV RALAEAGFQA VQLDVNDAAA 
LARLAEELEV ETAGLDVLVN NAGYGAMGPL LDGGVDAMRR QFETNVFAVV GVTRALFPLL
RRKSGLVVNV GSVSGVLVTP FAGAYCASKA AVHALSDALR LELAPFGVEV LEVQPGAIAS
NFGASASREM DSVVDERSPW WPLRRQIQAR AAASQDNPTP AEDFARQLLA AVQRRPRPPL
VRIGNGSRAL PALARWMPRG LLERLLKKRF GLDTRL