Gene PA14_13590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_13590 
Symbol 
ID4381935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1168793 
End bp1169455 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content67% 
IMG OID639323641 
ProductABC transporter permease 
Protein accessionYP_789230 
Protein GI116051927 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTCT TCAGCGTGCT TTCCCATCTC GACTGGTCCC AGGTCGGCCA GCTCACCCTC 
CAGCACCTGC TGCTGGTACT GGTCGCCGTA GGCCTGGCGA TCCTCGTCGG CGTGCCGCTG
GGCGTGCTGA TGACCCGCTT CACGTGGCTG GCCGGCCCGT TGCAGGGCGC CGCCACGGTG
ATGCTGACCA TCCCCTCGAT CGCCCTGTTC GGCCTGCTGA TGCCGGTCTA CTCGGTATTC
GGCCAGGGCC TCGGGCCGCT GCCGGCGATC ACCGCGGTGT TCCTCTATTC GCTGCTGCCG
ATCCTGCGCA ACACCTACCT TGCCCTGACC GGCGTCGAAG CAGGCATCCG CGAGGCCGGC
AAGGGCATCG GCATGACCTT CTGGCAACGC CTGCGGATGG TCGACATTCC CCTCGCGGTG
CCGGTGATCC TCGCCGGCGT ACGCACCGCC GTGGTGATGA ACATCGGCGT GATGACCATC
GCCGCGGTGA TCGGCGCCGG CGGCCTGGGC GTGCTGATCC TCACTTCCAT CAGCCAGAGC
AACATGCCGA TGCTGGTGGT CGGCGCGGTA CTGGTCAGCC TCCTGGCCAT CGTCGCCGAC
CTGCTGCTGC AATGGCTGCA ACGCATCCTC ACCCCCAAGG GACTGCGCGC CAGCGCGCAC
TGA
 
Protein sequence
MDFFSVLSHL DWSQVGQLTL QHLLLVLVAV GLAILVGVPL GVLMTRFTWL AGPLQGAATV 
MLTIPSIALF GLLMPVYSVF GQGLGPLPAI TAVFLYSLLP ILRNTYLALT GVEAGIREAG
KGIGMTFWQR LRMVDIPLAV PVILAGVRTA VVMNIGVMTI AAVIGAGGLG VLILTSISQS
NMPMLVVGAV LVSLLAIVAD LLLQWLQRIL TPKGLRASAH