Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_13590 |
Symbol | |
ID | 4381935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1168793 |
End bp | 1169455 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639323641 |
Product | ABC transporter permease |
Protein accession | YP_789230 |
Protein GI | 116051927 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTTCT TCAGCGTGCT TTCCCATCTC GACTGGTCCC AGGTCGGCCA GCTCACCCTC CAGCACCTGC TGCTGGTACT GGTCGCCGTA GGCCTGGCGA TCCTCGTCGG CGTGCCGCTG GGCGTGCTGA TGACCCGCTT CACGTGGCTG GCCGGCCCGT TGCAGGGCGC CGCCACGGTG ATGCTGACCA TCCCCTCGAT CGCCCTGTTC GGCCTGCTGA TGCCGGTCTA CTCGGTATTC GGCCAGGGCC TCGGGCCGCT GCCGGCGATC ACCGCGGTGT TCCTCTATTC GCTGCTGCCG ATCCTGCGCA ACACCTACCT TGCCCTGACC GGCGTCGAAG CAGGCATCCG CGAGGCCGGC AAGGGCATCG GCATGACCTT CTGGCAACGC CTGCGGATGG TCGACATTCC CCTCGCGGTG CCGGTGATCC TCGCCGGCGT ACGCACCGCC GTGGTGATGA ACATCGGCGT GATGACCATC GCCGCGGTGA TCGGCGCCGG CGGCCTGGGC GTGCTGATCC TCACTTCCAT CAGCCAGAGC AACATGCCGA TGCTGGTGGT CGGCGCGGTA CTGGTCAGCC TCCTGGCCAT CGTCGCCGAC CTGCTGCTGC AATGGCTGCA ACGCATCCTC ACCCCCAAGG GACTGCGCGC CAGCGCGCAC TGA
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Protein sequence | MDFFSVLSHL DWSQVGQLTL QHLLLVLVAV GLAILVGVPL GVLMTRFTWL AGPLQGAATV MLTIPSIALF GLLMPVYSVF GQGLGPLPAI TAVFLYSLLP ILRNTYLALT GVEAGIREAG KGIGMTFWQR LRMVDIPLAV PVILAGVRTA VVMNIGVMTI AAVIGAGGLG VLILTSISQS NMPMLVVGAV LVSLLAIVAD LLLQWLQRIL TPKGLRASAH
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