Gene PA14_13470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_13470 
Symbol 
ID4381943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1158474 
End bp1159355 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content70% 
IMG OID639323633 
ProductAraC family transcriptional regulator 
Protein accessionYP_789222 
Protein GI116051935 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0899227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCAAC CCAGCGATTT CCAGGTATTC CGCACCCTCG ACCGGACCTC CAATGCGCGC 
CTGCTGCGCA GCAGCACGCT CAGCGACGGC CTGGCGCTCG CCCATTGGTA CCGCGACGAA
GCGGAGATCC TCGGCTACAG CGACCCCGGC CATCACACCC TGTCGCTCTA CCTGCAGGGC
GGCTGGCAGA CCTTCCGCCG CGATCGTCCC GGGCTCTATG GCGGCCCCGA TCGCTTCTGC
GTGATGCCGG CCGAACACCA CTCCGACTGG GCGGTGACAC GCGGCCTGGG CTTCATGCAC
CTGTACATCA GCCCGGAACG CCTGGCCGGC GCGGCGGTAC GCACCCTCGA TTGCGAACCG
CGCAGCCTGC AACTGGAGGA GCGCACCTAC ATCCAGGACG AGCCGCTGGC CGCCCTGTGC
CGGACCCTGG AACGACAGGA CTGGAACGAA CCCGGCGAGC GCCTGCTATG CACCAGCCTC
GCCCACCAGG CGGTGGACCA CCTGCTGCTC ACCGGGTGCG GCAGGCGTAC CGACGTGCGC
TGGCAGGGCG GGCTGGCCGC GCACGTGCGG CGGCGCCTGG CCGACTACAT CGAAAGCCAC
CTGGAGCAGC CGCTGGAACT GGGGTCGCTG GCGGAGCTGG CGGCGCTCTC CGAGTACCAC
TTCGCGCGCA TGTTCCGCGT CTCCTTCGGC CTGCCGCCGC ACCGCTACGT GCTGGAACGA
CGCCTGGCGC GGGCCCGCGA CCTGCTGGCG TACTCCGCGC AGTCGCTCCA GGAGGTCTCG
CTGGCCTGCG GCTTCGCCAG TCCGAGCCAT TTCAACCGAC GCTTCCGCGA AGCCCATGGC
GCCACCCCGG GGCAGTACCG CGCCGCCCTG AAAGCCTCCT GA
 
Protein sequence
MHQPSDFQVF RTLDRTSNAR LLRSSTLSDG LALAHWYRDE AEILGYSDPG HHTLSLYLQG 
GWQTFRRDRP GLYGGPDRFC VMPAEHHSDW AVTRGLGFMH LYISPERLAG AAVRTLDCEP
RSLQLEERTY IQDEPLAALC RTLERQDWNE PGERLLCTSL AHQAVDHLLL TGCGRRTDVR
WQGGLAAHVR RRLADYIESH LEQPLELGSL AELAALSEYH FARMFRVSFG LPPHRYVLER
RLARARDLLA YSAQSLQEVS LACGFASPSH FNRRFREAHG ATPGQYRAAL KAS