| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_13340 |
|---|
| Symbol | |
|---|
| ID | 4381954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 1146258 |
|---|
| End bp | 1148600 |
|---|
| Gene Length | 2343 bp |
|---|
| Protein Length | 780 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639323622 |
|---|
| Product | extracellular nuclease |
|---|
| Protein accession | YP_789211 |
|---|
| Protein GI | 116051946 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2374] Predicted extracellular nuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0905495 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCTCT TGCGTAACGC CGCCCTGCTG GGCGGCCTGG CCCTGCTGGG CCTGCCGGTG
GCCAACGCCG CCGAGCTGAT CATCTCCGAG TATGTCGAAG GCAGCGGCAA CAACAAGGCG
CTGGAGTTCT ACAACAGCGG CAGCCAGGTC CTCGACCTCT CCGCCTACCG CGTCGAGTTC
TATTTCAACG GCGCCAGCGC GGCGGGCCGC AGCATCGACC TGAGCGGCAG CCTGGCGCCG
GGCAAGACCT TCGTCCTCGC CAACGGCGTG GCCGACCCGG CGTTGCTGGC GCTGGCCAGC
CAGCGGGTGG AGGGCAGCTG GTTCAATGGC AACGATGCGG TGCTGCTGCG CCGGCGCAGC
GGCGAGATCC TCGACAGCCT CGGCCAGGTC GGCTTCAACC CCGGCACGAC CTGGGGCAGC
GGCGATGTGC AGACCCTCGA CCGGAGCCTG GTGCGCAAGG CCGACATCCG CGACGGCGAC
AGCGATCCCA GCGACGCCTT CGACCCGGCG GCGCAATGGC TGGGCTACCC GCGCGACACC
TTCGCCAACC TCGGCCAGCA TGGCGCTGGT GAGCCCGGCG GCGGCGAGGA GGCCGGCCTG
CGACCGATCC ATGAGGTGCA GGGCGCCGGC GCCGAAAGTC CGCTGGTGAA CCAGCGGGTC
GCCATCGAGG GCGTGGTGGT CGGCGACTTC CAGAACGCCA GCGAGCTGAA GGGCTTCTAC
GTGCAGCAGG AAGATGCCAC GGTGGACGGC GACCCGGCGA CCTCCGAAGG CATCTTCGTC
TACGACGGCG GCAACGGCAG CGACGTCAAG CTCGGCGACC GCGTCCGGGT GACCGGCCAG
GTCCGCGAGT TCAACGGCCT CACCGAACTG GTCGGGCCGC TGCAGGTCAG CGTCCTGGCG
AGCGGCGTGG CCTTGCCGAC GCCGGCCGGC ATCAGCCTGC CGCTGGCCAG CGCCGATGCG
CTGGAGCGCT ACGAAGGCAT GCGCGTGCAG CTCCGCCAGA CGCTGACCGT CAACGAGGTC
TACAACCTCG GCCGCTACGG CGAGGTCCTG CTGTCCTCCG GCGGCCGCCA GATGACTCCG
ACCAACGTGG TGGCTCCCGG CGAACAGGCC AAGGCCATGC AGGCGCGCAA CGACCTCGAC
CGGATTCTCC TCGACGACGG CCGCAGCGGG CAGAACCCCG ACCCGATCCG CTACCCGGCG
CCGGAACTGA GCGCCTACAA CAGCCTGCGC GTCGGCGATC GCACCAGCGC CATCGACGGC
GTGCTCGACT ACTCGGCCGG CAGCTACCGT ATCCAGCCGT TGCAGACGCC GACCTTCGAG
GCGGCCAATC CGCGTCCGGC CCAGCCGGCG GTGGAAGGGC GCCTGCGGGT GGCCAGCTTC
AACGTGCTCA ACTACTTCAA CGGCGATGGC AAGGGCGGCG GTTTCCCCAC CTCGCGCGGA
GCCAACACGG CCGAGGAGTT CCAGCGGCAG AAAGCGAAGA TCGTCGCGGC GATCCTCGCC
TCGAAGGCGG ACATCGTCGG CCTGATGGAG ATCGAGAACG ACGGCTACGG CGAGTTCAGT
GCCATCGCCG ACCTGGTCAA CGGCCTCAAC GCCAGCCTGC CCCAGGGCCA GCGCTATGCC
TTCGTCAACC CGAACCGGGC GAAGCTGGGC AGCGACGAGA TTGCCGTGGG GCTGATCTAT
CGCGGCGACA AGGTCCGCAT CTATCGATCC GCGGCGGTGC TCGACAGTTC GGTGAACCCG
GAGTTCGACG ACACCCGCAA CCGTCCGACC CTGGCCCAGA CCTTCCAGGA GATCAATGGC
GGCGAACGCC TGACCATCGC GGTGAACCAC CTGAAGTCGA AGGGCTCGGC CTGCGACGGT
GACCCGGACA CCGGCGACGG CCAGGGCAAC TGCAACCTGA CCCGGGCGCG CGCCGCCCAG
GCCCTGGTGG ACTGGCTGGC GGGCGATCCG ACGGGCGCCA AGGAACCTGA CCGCCTGATC
ATCGGCGACC TCAATTCCTA TGCCAAGGAA GACCCGGTGA ACGTCATCCG CGGCGCCGGC
TACACCGACC TGGTGGCGCG TCAGGCGGGC GCAGGAAAGG GCTACTCCTA CGTGTTCTCC
GGGCAGTCCG GCTACCTCGA CCACGCCCTC GCCAACGCCA GCCTGGCGCG CCAGGTACGC
GGCGCGGTGG AGTGGCACAT CAACGCCGAC GAGCCCCGGG TGCTGGACTA CAACGTCGAG
TTCAAGACCC CTCGGCAGCA GGACAGCCTG TACAACGCCG AGCCGTACCG GGCCTCCGAC
CACGACCCGG TGGTGATCGG TATCGACCTG CGCCGGGTGG CGATGAAGAA GCACCGCAGG
TAG
|
|---|
| Protein sequence | MHLLRNAALL GGLALLGLPV ANAAELIISE YVEGSGNNKA LEFYNSGSQV LDLSAYRVEF
YFNGASAAGR SIDLSGSLAP GKTFVLANGV ADPALLALAS QRVEGSWFNG NDAVLLRRRS
GEILDSLGQV GFNPGTTWGS GDVQTLDRSL VRKADIRDGD SDPSDAFDPA AQWLGYPRDT
FANLGQHGAG EPGGGEEAGL RPIHEVQGAG AESPLVNQRV AIEGVVVGDF QNASELKGFY
VQQEDATVDG DPATSEGIFV YDGGNGSDVK LGDRVRVTGQ VREFNGLTEL VGPLQVSVLA
SGVALPTPAG ISLPLASADA LERYEGMRVQ LRQTLTVNEV YNLGRYGEVL LSSGGRQMTP
TNVVAPGEQA KAMQARNDLD RILLDDGRSG QNPDPIRYPA PELSAYNSLR VGDRTSAIDG
VLDYSAGSYR IQPLQTPTFE AANPRPAQPA VEGRLRVASF NVLNYFNGDG KGGGFPTSRG
ANTAEEFQRQ KAKIVAAILA SKADIVGLME IENDGYGEFS AIADLVNGLN ASLPQGQRYA
FVNPNRAKLG SDEIAVGLIY RGDKVRIYRS AAVLDSSVNP EFDDTRNRPT LAQTFQEING
GERLTIAVNH LKSKGSACDG DPDTGDGQGN CNLTRARAAQ ALVDWLAGDP TGAKEPDRLI
IGDLNSYAKE DPVNVIRGAG YTDLVARQAG AGKGYSYVFS GQSGYLDHAL ANASLARQVR
GAVEWHINAD EPRVLDYNVE FKTPRQQDSL YNAEPYRASD HDPVVIGIDL RRVAMKKHRR
|
|---|
| |