Gene PA14_13340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_13340 
Symbol 
ID4381954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1146258 
End bp1148600 
Gene Length2343 bp 
Protein Length780 aa 
Translation table11 
GC content69% 
IMG OID639323622 
Productextracellular nuclease 
Protein accessionYP_789211 
Protein GI116051946 
COG category[R] General function prediction only 
COG ID[COG2374] Predicted extracellular nuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0905495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTCT TGCGTAACGC CGCCCTGCTG GGCGGCCTGG CCCTGCTGGG CCTGCCGGTG 
GCCAACGCCG CCGAGCTGAT CATCTCCGAG TATGTCGAAG GCAGCGGCAA CAACAAGGCG
CTGGAGTTCT ACAACAGCGG CAGCCAGGTC CTCGACCTCT CCGCCTACCG CGTCGAGTTC
TATTTCAACG GCGCCAGCGC GGCGGGCCGC AGCATCGACC TGAGCGGCAG CCTGGCGCCG
GGCAAGACCT TCGTCCTCGC CAACGGCGTG GCCGACCCGG CGTTGCTGGC GCTGGCCAGC
CAGCGGGTGG AGGGCAGCTG GTTCAATGGC AACGATGCGG TGCTGCTGCG CCGGCGCAGC
GGCGAGATCC TCGACAGCCT CGGCCAGGTC GGCTTCAACC CCGGCACGAC CTGGGGCAGC
GGCGATGTGC AGACCCTCGA CCGGAGCCTG GTGCGCAAGG CCGACATCCG CGACGGCGAC
AGCGATCCCA GCGACGCCTT CGACCCGGCG GCGCAATGGC TGGGCTACCC GCGCGACACC
TTCGCCAACC TCGGCCAGCA TGGCGCTGGT GAGCCCGGCG GCGGCGAGGA GGCCGGCCTG
CGACCGATCC ATGAGGTGCA GGGCGCCGGC GCCGAAAGTC CGCTGGTGAA CCAGCGGGTC
GCCATCGAGG GCGTGGTGGT CGGCGACTTC CAGAACGCCA GCGAGCTGAA GGGCTTCTAC
GTGCAGCAGG AAGATGCCAC GGTGGACGGC GACCCGGCGA CCTCCGAAGG CATCTTCGTC
TACGACGGCG GCAACGGCAG CGACGTCAAG CTCGGCGACC GCGTCCGGGT GACCGGCCAG
GTCCGCGAGT TCAACGGCCT CACCGAACTG GTCGGGCCGC TGCAGGTCAG CGTCCTGGCG
AGCGGCGTGG CCTTGCCGAC GCCGGCCGGC ATCAGCCTGC CGCTGGCCAG CGCCGATGCG
CTGGAGCGCT ACGAAGGCAT GCGCGTGCAG CTCCGCCAGA CGCTGACCGT CAACGAGGTC
TACAACCTCG GCCGCTACGG CGAGGTCCTG CTGTCCTCCG GCGGCCGCCA GATGACTCCG
ACCAACGTGG TGGCTCCCGG CGAACAGGCC AAGGCCATGC AGGCGCGCAA CGACCTCGAC
CGGATTCTCC TCGACGACGG CCGCAGCGGG CAGAACCCCG ACCCGATCCG CTACCCGGCG
CCGGAACTGA GCGCCTACAA CAGCCTGCGC GTCGGCGATC GCACCAGCGC CATCGACGGC
GTGCTCGACT ACTCGGCCGG CAGCTACCGT ATCCAGCCGT TGCAGACGCC GACCTTCGAG
GCGGCCAATC CGCGTCCGGC CCAGCCGGCG GTGGAAGGGC GCCTGCGGGT GGCCAGCTTC
AACGTGCTCA ACTACTTCAA CGGCGATGGC AAGGGCGGCG GTTTCCCCAC CTCGCGCGGA
GCCAACACGG CCGAGGAGTT CCAGCGGCAG AAAGCGAAGA TCGTCGCGGC GATCCTCGCC
TCGAAGGCGG ACATCGTCGG CCTGATGGAG ATCGAGAACG ACGGCTACGG CGAGTTCAGT
GCCATCGCCG ACCTGGTCAA CGGCCTCAAC GCCAGCCTGC CCCAGGGCCA GCGCTATGCC
TTCGTCAACC CGAACCGGGC GAAGCTGGGC AGCGACGAGA TTGCCGTGGG GCTGATCTAT
CGCGGCGACA AGGTCCGCAT CTATCGATCC GCGGCGGTGC TCGACAGTTC GGTGAACCCG
GAGTTCGACG ACACCCGCAA CCGTCCGACC CTGGCCCAGA CCTTCCAGGA GATCAATGGC
GGCGAACGCC TGACCATCGC GGTGAACCAC CTGAAGTCGA AGGGCTCGGC CTGCGACGGT
GACCCGGACA CCGGCGACGG CCAGGGCAAC TGCAACCTGA CCCGGGCGCG CGCCGCCCAG
GCCCTGGTGG ACTGGCTGGC GGGCGATCCG ACGGGCGCCA AGGAACCTGA CCGCCTGATC
ATCGGCGACC TCAATTCCTA TGCCAAGGAA GACCCGGTGA ACGTCATCCG CGGCGCCGGC
TACACCGACC TGGTGGCGCG TCAGGCGGGC GCAGGAAAGG GCTACTCCTA CGTGTTCTCC
GGGCAGTCCG GCTACCTCGA CCACGCCCTC GCCAACGCCA GCCTGGCGCG CCAGGTACGC
GGCGCGGTGG AGTGGCACAT CAACGCCGAC GAGCCCCGGG TGCTGGACTA CAACGTCGAG
TTCAAGACCC CTCGGCAGCA GGACAGCCTG TACAACGCCG AGCCGTACCG GGCCTCCGAC
CACGACCCGG TGGTGATCGG TATCGACCTG CGCCGGGTGG CGATGAAGAA GCACCGCAGG
TAG
 
Protein sequence
MHLLRNAALL GGLALLGLPV ANAAELIISE YVEGSGNNKA LEFYNSGSQV LDLSAYRVEF 
YFNGASAAGR SIDLSGSLAP GKTFVLANGV ADPALLALAS QRVEGSWFNG NDAVLLRRRS
GEILDSLGQV GFNPGTTWGS GDVQTLDRSL VRKADIRDGD SDPSDAFDPA AQWLGYPRDT
FANLGQHGAG EPGGGEEAGL RPIHEVQGAG AESPLVNQRV AIEGVVVGDF QNASELKGFY
VQQEDATVDG DPATSEGIFV YDGGNGSDVK LGDRVRVTGQ VREFNGLTEL VGPLQVSVLA
SGVALPTPAG ISLPLASADA LERYEGMRVQ LRQTLTVNEV YNLGRYGEVL LSSGGRQMTP
TNVVAPGEQA KAMQARNDLD RILLDDGRSG QNPDPIRYPA PELSAYNSLR VGDRTSAIDG
VLDYSAGSYR IQPLQTPTFE AANPRPAQPA VEGRLRVASF NVLNYFNGDG KGGGFPTSRG
ANTAEEFQRQ KAKIVAAILA SKADIVGLME IENDGYGEFS AIADLVNGLN ASLPQGQRYA
FVNPNRAKLG SDEIAVGLIY RGDKVRIYRS AAVLDSSVNP EFDDTRNRPT LAQTFQEING
GERLTIAVNH LKSKGSACDG DPDTGDGQGN CNLTRARAAQ ALVDWLAGDP TGAKEPDRLI
IGDLNSYAKE DPVNVIRGAG YTDLVARQAG AGKGYSYVFS GQSGYLDHAL ANASLARQVR
GAVEWHINAD EPRVLDYNVE FKTPRQQDSL YNAEPYRASD HDPVVIGIDL RRVAMKKHRR