Gene PA14_13060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_13060 
Symbol 
ID4381975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1120835 
End bp1121623 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content68% 
IMG OID639323601 
Productputative transcriptional regulator 
Protein accessionYP_789190 
Protein GI116051967 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG AGCACCGCCC GGACGGCCTG CTGGCCGCCA TCTCCCTCGA CTTCCCCGAC 
AGCCATCACC TGGGGCGGCA TTTCCACCCG CAGGCGCAGT TCCTCTACGC CGCTCGCGGC
CTGATGCGCC TGGCCACCCA CCACGGCGCC TGGGTGATCC CGCCGACCCG CGCGGTATGG
ATTCCGCCCC GGGTGGAGCA CGAGATATTC ATGTCCGGCG AGGTGCACAT GCGCACCCTG
TTCATCGAGC AACCCGAAAC GCCGACACCG CTAAGCGACT GTTGCGTACT GGCGGTGACG
CCGCTGCTGC GGGAAATGAT CCTGCGCGCC ATCCACCTCG AGAGCCAGCC GCGCCTGGAC
GACTTCCGCC AGCGCCTGCA AGGGCTGATC CTCAGCGAGA TCGCCAACCT CGAACGGATG
CCGCTGTACC TGCCGATGCC CCGCGACCGC CGCTTGCAGG CGATCTGCCA GGCATTGCTG
AAACAGCCGG AACTGGGGCT GACCCTCGAT GACTGGGGCC TGCGGGTCGG CGCCAGCTCG
CGCACCCTGG CGCGGCTGTT CGCCCAGGAA TTGCAGATGA GCTTCCATGA GTGGCGCCAG
CAACTGCGCC TGACCGAAGC CCTGCCGCGC CTGCTGGCCG GCGACAGCGT GCAGGTGGTC
GCCCGCGACC TCGGCTACGG TAGTACGCGG GCCTTCAGCA GCATGTTCCG TCGCCTGCTC
GGCGAAACCC CGCGCGACTA CCTGGGGCGA CTGGAGCAAC TGGCACGGGT CAGGGGCCGC
GAGGACTGA
 
Protein sequence
MLIEHRPDGL LAAISLDFPD SHHLGRHFHP QAQFLYAARG LMRLATHHGA WVIPPTRAVW 
IPPRVEHEIF MSGEVHMRTL FIEQPETPTP LSDCCVLAVT PLLREMILRA IHLESQPRLD
DFRQRLQGLI LSEIANLERM PLYLPMPRDR RLQAICQALL KQPELGLTLD DWGLRVGASS
RTLARLFAQE LQMSFHEWRQ QLRLTEALPR LLAGDSVQVV ARDLGYGSTR AFSSMFRRLL
GETPRDYLGR LEQLARVRGR ED