| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_12990 |
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| Symbol | |
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| ID | 4381981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 1113381 |
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| End bp | 1115342 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639323595 |
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| Product | choline transporter |
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| Protein accession | YP_789184 |
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| Protein GI | 116051973 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.283179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCC CGGTGTTCTA CGGTGCGGCG ATCCTGATCC TGCTGTTCGC CGCGGTGGTC
ATCGGCTTCC CCCAGCGCGC CGGCGAATGG CTGCTGGCCG CACAGACCTG GGCCTCGCAG
ACCGTCGGTT GGTACTACCT GCTGGCGATG ACGCTGTACC TGATCTTCGT GGTGGTCACC
GCGCTTTCCG GCTACGGCAA GATCAAGCTC GGTGCCGACC ACGACGAGCC GGAATTCAGC
TACCTGTCCT GGGCCGGCAT GCTGTTCGCC GCCGGCATCA GCATCACCCT GTTCTTCTTC
TGCGTATCCG AGCCGTTGAC CCACTTCCTC CAGCCGCCGC AAGGCGAGGC CGGAACCCAG
GAAGCCGCGC GGCAGGCCAT GGAACTGCTG TTCCTGCACT GGGGCCTGCA CGGCTGGGGC
GTGTTCGCCC TGGTGGCGAT GGCCCTGGCC TACTTCGCCT ACCGCCACAA CCTGCCACTG
GCCCTGCGCT CGGCGCTCTA CCCGTTGATC GGCAAGCGCA TCAACGGGCC GATCGGCTAC
ACGGTGGACT GCTTCGGCAT CATCGCCACG GTGTTCGGCC TCGGCGCCGA CATGGGCTTC
GGCGTGCTCC AGCTCAACTC CGGGCTGGAC TACCTGTACG CCATCCCGCA TACCCACCCG
GTGCAGATGG CGCTCATCGT GCTGATGATG GGCGCGGCGA TCTCGGTGGC GGTCTCCGGG
GTCGACAAGG GCATCCGCAT CCTCTCCGAC ATCAACATGC TGCTGGCCTG CAGCCTGCTG
CTGTTCGTGC TGTTCGCCGG TCCGACCCAG CACCTGCTCA ACACCCTGGT GCAGAACGTC
GGCGACTACC TCGGCCACCT GCCGGGCAAG AGCTTCGACC TCTACGCCTA CGGTGGTCCC
AGCGACTGGC TGGGCTCGTG GACGGTGTTC TACTGGGCCT GGTGGATCGC CTGGGCGCCC
TTCGTGGGCC TGTTCATCGC GCGCATCTCG CGCGGCCGGA CGATCCGCGA ATTCGTCTTC
GGCGTGCTGT TCATCCCGCT CGGCTTCACC CTGGCGTGGA TGTCGATCTT CGGCAACAGC
GCCCTGGAGC AGGCCCTCGG CGGCGCCAGC GAACTCGGCC GGGTGGCCAT CGAGCAGCCG
TCGATGGCCC TCTACCAGAT GCTCCAGAAC TACCCCTGGA GCCGCGCGGT GATCACCGTC
ACTGTGCTGG TCAGCTTCGT CTTCTTCGTC ACCTCGGCGG ACTCCGGCAC CGTGGTCCTC
TCCACCCTCT CCGCCCACGG CGGCAGCGCC GACGACGACG GACCGAAGTG GCTGCGGGTG
TTCTGGGGCT CGGTCACCGC GCTGGTCACC GGCGGGCTGC TGTTCGCCGG CAGCATCGAC
GCGCTGAAGT CGGCGGTGGT GCTGACCTCC CTGCCCTTCT CGCTGATCCT GCTATTGATG
ATGTGGGGCC TGCACAAGGC CTTCTACATG GAGTCGCAGC GCCAGCGGGC GCGGAGCCAC
TCCCTGGCGC CGCTGATGAG CGGCAACGGC AAGCGCTCCG GCGGCTGGAA GCGACGCCTG
TCGCAGGCCG TGCACTTCCC CTCGCGGGAC GAGGTGTACC GCTTCATGAA CGACGTTGTG
CGCCCGGCGA TCAGCGAGGT TTCCGAGGTG TTCCGCGAGA AGGGCCTGGC GGTGGACGCC
CAGCTCGACC CGGGCAACGC CTCGCTGAGC CTGGAGATCG GTCATGGCGA GCAGCATCGG
TTCCTCTACC AGGTGCTGAT GCGCGGCTAC TTCACGCCGT CCTTCGCGCG TGCCGGCATG
GGCGGCCTGC ACCTGAAGAA TCGCCGCTAC TTCCGTGCCG AGGTGCATCT CGCCGAAGGT
AGCCAGGACT ACGATCTGAT GGGCTACACC AAGGAGCAGA TCATCAACGA CATGCTCGAC
CAGTACGAGC GGCACCTGCA GTTCCTGCAC CTGGTGCGTT GA
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| Protein sequence | MNPPVFYGAA ILILLFAAVV IGFPQRAGEW LLAAQTWASQ TVGWYYLLAM TLYLIFVVVT
ALSGYGKIKL GADHDEPEFS YLSWAGMLFA AGISITLFFF CVSEPLTHFL QPPQGEAGTQ
EAARQAMELL FLHWGLHGWG VFALVAMALA YFAYRHNLPL ALRSALYPLI GKRINGPIGY
TVDCFGIIAT VFGLGADMGF GVLQLNSGLD YLYAIPHTHP VQMALIVLMM GAAISVAVSG
VDKGIRILSD INMLLACSLL LFVLFAGPTQ HLLNTLVQNV GDYLGHLPGK SFDLYAYGGP
SDWLGSWTVF YWAWWIAWAP FVGLFIARIS RGRTIREFVF GVLFIPLGFT LAWMSIFGNS
ALEQALGGAS ELGRVAIEQP SMALYQMLQN YPWSRAVITV TVLVSFVFFV TSADSGTVVL
STLSAHGGSA DDDGPKWLRV FWGSVTALVT GGLLFAGSID ALKSAVVLTS LPFSLILLLM
MWGLHKAFYM ESQRQRARSH SLAPLMSGNG KRSGGWKRRL SQAVHFPSRD EVYRFMNDVV
RPAISEVSEV FREKGLAVDA QLDPGNASLS LEIGHGEQHR FLYQVLMRGY FTPSFARAGM
GGLHLKNRRY FRAEVHLAEG SQDYDLMGYT KEQIINDMLD QYERHLQFLH LVR
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