| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_12980 |
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| Symbol | |
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| ID | 4381982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1111237 |
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| End bp | 1113273 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639323594 |
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| Product | hypothetical protein |
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| Protein accession | YP_789183 |
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| Protein GI | 116051974 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.28182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAAC GCATCCCGGA TGAGCTGACC CTGCCAGAGC TCACCCTGCG TGGCCTGATC
CTCGGTGCGC TGATCACCGT GGTCTTCACC GCCTCCAACG TCTACCTCGG TCTGAAGGTC
GGCCTGACCT TCGCCTCGTC GATCCCGGCG GCGGTGATCT CGATGGCCGT CCTGCGCTAC
TTCTCCGGCG CCAACATCCT CGAGAACAAC ATGGTGCAGA CCCAGGCCTC GGCGGCCGGC
ACTCTGTCCT CGATCATCTT CATCCTTCCC GGCCTGCTGA TGATCGGCTA CTGGAGTGGC
TTCCCGTTCT GGCAGACCGC GGCGATCTGC TCCATCGGCG GCATTCTCGG GGTGCTCTAT
ACCATTCCGC TGCGCCGGGT GATGGTGGTG CAGAGCGAAC TGCCGTATCC GGAAGGGGTG
GCGGCGGCGG AAATCCTCCG GGTCGGCAGC GACGGCGCCG AGGACGAGGA AGACGCCCGC
GCGCCGCGTG CCGCCGGTAA CGCGCCGGGG CTCTACGACA TCCTCGGCGG CGGCCTGGTG
GCGGCGCTGT TCAGCCTCTG GAGCAGCGGC TTCAAGGTTC TCGCCGAAGG CTTCAGCGTC
TGGCTCAGTG CCGGGCAGGC GGCGTTCCGC CTTTCCACCG GTTTTTCCCT GGCTCTGGTC
GGTGCCGGCT ACCTGATGGG CATCACCGCC GGCATCGCGA TCCTCATCGG CGTGGTGATC
TCCTGGGGCG TCGCGGTGCC GTTGCTGACC GTCAACAGCG TGCCGGCCGA CGGCCAGAGC
CTGTCGGACC TGGCCACCCA ACTGTGGAGT TCGCAGGTGC GCTTCCTCGG CGCCGGCACC
ATCGGCGTGG CCGCGCTGTG GACCCTGGCG ACCCTGTTCA AGCCGATGGT GCGGGGCGTC
TGGGCCTCCC TCGGGGCAGT GCGCGGCAAT AGCCAGGCGA GCAGCCTGCG CACCGAGCTG
GACATGCCGG CCAAGTGGAT CCTGCTGATC GCCGGGATAC TGCTGGTCTC GCTGTTCGTG
GTCTTCAGCC ACTTCCTCGG TGCCGCCGCG CCGGACATGG CCAGCCCGCA GTTCTGGAGC
CTGGTGGCGG TATGCGTGGT GTTCGCCTTC TTCTTCGGCT TCCTGATCGC CGCCGCCTGC
GGCTACATGG CCGGCCTGGT CGGTTCGTCG AGCAGTCCGA TCTCGGGGAT CGGAATCATC
GCGGTCATCC TGGTGTCGTT GCTGATACTC GGCTTCGGCA GCATCGAGGG CGGCCTGCTG
GACCGCCAGA ACGGCAAGCT GGCGATCGCC CTGGCGCTGT TCACCACCTC GGTGGTGCTG
GCCATCGCGG CGATCTCCAA CGACAACCTG CAAGACCTCA AGACCGGCTA CCTGGTCGGC
GCCACGCCCT GGCGCCAGCA GGTCGCGCTG ATCGTCGGCT GCATCGTCGG CGCGCTGGTG
ATCCCCCCGG TGCTGGAACT GCTCTACAGC GCCTACGGCT TCACCGGGGC CCTGCCGCGC
GAGGGAATGG ACCCCGGCCA GGCCCTGGCC GCGCCGCAGG CGACCCTGAT GACGGCGATC
GCCAGCGGGA TTTTCCACGA CGCGCTGAAC TGGAACATGA TTCTCATCGG CGTCGCCCTG
GGCATCGCCC TGATCCTCGT CGACCTGCTC CTGCGCCGTA CCGGCAAGGC CTGCCTGCCG
GTGCTGGCGG TGGGCCTGGG GATCTACCTG CCGCCGACCA TCGGCATGAC CCTGGTGGTC
GGCGCGCTGA TTTCCTGGCT ACTGGAAAAT GCCCTGAAGA AGCGCGCGGC GGCAGCCGGG
GTCGACGAAG AGACCTATGC CGAAGAGCCG AAGCGACGCG GCGTGCTGCT GGCCTCGGGG
CTGATCGTCG GCGAGAGCCT GATGGGCATC CTGCTCGCCG GGGTGATCGG CGCCACCGGC
GAGGACGCGC CGCTGGCGCT GGCCGGCGCC GGCTTCGCGG GCATCGCCCA GTGGCTGGGA
CTGGTGGTAT TCGTCGCGAT CTGCGTGCTG TTCTACCGGC GAGTGCTGGC GCGCTGA
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| Protein sequence | MQERIPDELT LPELTLRGLI LGALITVVFT ASNVYLGLKV GLTFASSIPA AVISMAVLRY
FSGANILENN MVQTQASAAG TLSSIIFILP GLLMIGYWSG FPFWQTAAIC SIGGILGVLY
TIPLRRVMVV QSELPYPEGV AAAEILRVGS DGAEDEEDAR APRAAGNAPG LYDILGGGLV
AALFSLWSSG FKVLAEGFSV WLSAGQAAFR LSTGFSLALV GAGYLMGITA GIAILIGVVI
SWGVAVPLLT VNSVPADGQS LSDLATQLWS SQVRFLGAGT IGVAALWTLA TLFKPMVRGV
WASLGAVRGN SQASSLRTEL DMPAKWILLI AGILLVSLFV VFSHFLGAAA PDMASPQFWS
LVAVCVVFAF FFGFLIAAAC GYMAGLVGSS SSPISGIGII AVILVSLLIL GFGSIEGGLL
DRQNGKLAIA LALFTTSVVL AIAAISNDNL QDLKTGYLVG ATPWRQQVAL IVGCIVGALV
IPPVLELLYS AYGFTGALPR EGMDPGQALA APQATLMTAI ASGIFHDALN WNMILIGVAL
GIALILVDLL LRRTGKACLP VLAVGLGIYL PPTIGMTLVV GALISWLLEN ALKKRAAAAG
VDEETYAEEP KRRGVLLASG LIVGESLMGI LLAGVIGATG EDAPLALAGA GFAGIAQWLG
LVVFVAICVL FYRRVLAR
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