| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_12810 |
|---|
| Symbol | |
|---|
| ID | 4381995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 1096875 |
|---|
| End bp | 1098053 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639323581 |
|---|
| Product | two-component response regulator |
|---|
| Protein accession | YP_789170 |
|---|
| Protein GI | 116051987 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0434149 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATT TGAATGTTCT GGTGTTGGAG GATGAGCCTT TTCAGCGCCT GGTAGCCGTC
ACAGCCCTGA AGAAAGTGGT GCCCGGATCG ATCCTCGAGG CGGCGGACGG CAAGGAGGCG
GTGGCGATCC TGGAGTCCTG CGGACACGTC GACATCGCCA TCTGCGACCT GCAGATGAGC
GGCATGGACG GCCTGGCATT CCTTCGCCAC GCAAGCCTGA GCGGCAAGGT TCATTCGGTG
ATCCTCAGCA GCGAGGTGGA TCCCATCCTG CGCCAGGCCA CCATTTCGAT GATCGAGTGC
CTGGGCCTCA ATTTTCTCGG CGACCTCGGC AAGCCATTCA GCCTGGAGCG GATCACCGCC
CTGTTGACCC GCTACAACGC TCGTCGCCAG GACCTGCCGC GACAGATCGA AGTCGCCGAG
CTGCCCTCCG TGGCGGACGT GGTGCGCGGC CTCGACAACG GCGAGTTCGA AGCCTACTAC
CAGCCCAAGG TGGCCCTGGA TGGCGGCGGC CTGATCGGCG CCGAGGTCCT GGCACGCTGG
AACCACCCGC ATCTCGGCGT ATTGCCGCCG TCGCATTTCC TCTATGTGAT GGAAACCTAC
AACCTGGTCG ACAAGCTGTT CTGGCAACTG TTCAGCCAGG GTCTGGCGAC GCGCAGGAAG
CTGGCGCAGT TGGGGCAGCC GATCAACCTG GCGTTCAACG TCCATCCTTC GCAACTGGGT
TCGCGTGCGC TGGCCGAGAA CATCTCGGCG TTGCTGACCG AGTTCCACCT GCCGCCCAGT
TCGGTGATGT TCGAGATCAC CGAGACCGGG TTGATCAGCG CTCCTGCCAG CAGCCTGGAG
AACCTCGTGC GTCTGCGGAT CATGGGCTGC GGCCTGGCGA TGGACGATTT CGGCGCCGGC
TATTCGTCCC TCGACCGGCT CTGCGAGTTT CCCTTCAGCC AGATCAAGCT GGACAGAACC
TTCGTCCAGA AGATGAAGAC CCAGCCCAGG AGTTGCGCCG TCATCAGCAG TGTCGTGGCG
TTGGCGCAGG CGCTGGGAAT TTCCCTGGTG GTGGAAGGGG TGGAGAGCGA CGAACAACGG
GTACGCCTGA TCGAACTCGG TTGCTCCATA GCCCAGGGCT ACCTGTTCGC CCGGCCGATG
CCGGAACAGC ACTTTCTCGA CTATTGCTCC GGATCCTGA
|
|---|
| Protein sequence | MNDLNVLVLE DEPFQRLVAV TALKKVVPGS ILEAADGKEA VAILESCGHV DIAICDLQMS
GMDGLAFLRH ASLSGKVHSV ILSSEVDPIL RQATISMIEC LGLNFLGDLG KPFSLERITA
LLTRYNARRQ DLPRQIEVAE LPSVADVVRG LDNGEFEAYY QPKVALDGGG LIGAEVLARW
NHPHLGVLPP SHFLYVMETY NLVDKLFWQL FSQGLATRRK LAQLGQPINL AFNVHPSQLG
SRALAENISA LLTEFHLPPS SVMFEITETG LISAPASSLE NLVRLRIMGC GLAMDDFGAG
YSSLDRLCEF PFSQIKLDRT FVQKMKTQPR SCAVISSVVA LAQALGISLV VEGVESDEQR
VRLIELGCSI AQGYLFARPM PEQHFLDYCS GS
|
|---|
| |