| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_12710 |
|---|
| Symbol | |
|---|
| ID | 4382002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 1089762 |
|---|
| End bp | 1090856 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639323574 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_789163 |
|---|
| Protein GI | 116051994 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.414846 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAG AGCAACAGCC GATCCACTTC GCCTACTGGG TCCCCAACGT CAGCGGCGGC
CTGGTGGTGA GCAAGATCGA GCAGCGCACC AGCTGGGACA TCGACTACAA CCGCAAGCTG
GCCCAGTTGG CGGAACGCAA CGGCTTCGAC TACGCCCTCT CGCAGATCCG CTTCACCGCC
GGCTACGGCG CCGAGTACCA GCACGAGTCG GTGGCCATCA GCCACGCCCT GCTGGCGGCC
ACCGAGAAGC TCAAGGTGAT CGCGGCGATC CTGCCTGGCC CCTGGCATCC TGCGGTCGTG
GCCAAGCAAC TGGCGACGAT CGACCAACTG ACCAATGGCC GGGTCGCGGT GAACATCGTC
AGCGGCTGGT TCAAGGGAGA GTTCACCGGC ATCGGCGAAC CCTGGCTGGA GCACGACGAA
CGCTATCGGC GCTCCGAAGA GTTCATCCGC GTGCTGAAAG GCATCTGGAC CGAGGAAAAC
TTCACCTTCA AGGGCGATTT CTATCGTTTC CACGACTACA CCCTGAAACC CAAGCCGATC
CAGCAGCCGC ACCCGGAAAT CTTCCAGGGC GGCAGCTCGC GGGCGGCGCG GGACATGGCC
TCGCGCGTGT CCGACTGGTA CTTCACCAAC GGCAACAGCA TCGACGGCAT CCGCGCCCAG
GTCGAGGACA TCCGCGCCAA GGCGGCGGCC AACGGCCATT CGGTCAAGGT CGGAGTGAAC
GCCTTCATCA TTGCCCGCGA CACCGAGGAG GAAGCGCGGG CGGTGCTCGA CGAGATCATC
GCCAAGGCCG ACTACGAGGC GGTGAACGCC TTCGGCGACG CGGTGAAACA GGCCGGCAAG
GCCTCGCCGG AGGGCGATGG CAACTGGGCC AAATCCACCT TCGAAGACCT GGTGCAATAC
AACGACGGCT TCAAGACCAA CCTGATCGGC ACGCCACGGC AGATCGCCGA ACGCATCGTC
GCGCTGAAGG CGGCCGGGGT CGACCTGGTG CTGTCGGCCT TCCTGCACTT CCACGAAGAA
GTGGAGTATT TCGGCAAGCA CGTGTTGCCG CTGGTCCGCG AACTGGAGCA GGCCCAGGCC
CGCGAAGCGG CCTGA
|
|---|
| Protein sequence | MSQEQQPIHF AYWVPNVSGG LVVSKIEQRT SWDIDYNRKL AQLAERNGFD YALSQIRFTA
GYGAEYQHES VAISHALLAA TEKLKVIAAI LPGPWHPAVV AKQLATIDQL TNGRVAVNIV
SGWFKGEFTG IGEPWLEHDE RYRRSEEFIR VLKGIWTEEN FTFKGDFYRF HDYTLKPKPI
QQPHPEIFQG GSSRAARDMA SRVSDWYFTN GNSIDGIRAQ VEDIRAKAAA NGHSVKVGVN
AFIIARDTEE EARAVLDEII AKADYEAVNA FGDAVKQAGK ASPEGDGNWA KSTFEDLVQY
NDGFKTNLIG TPRQIAERIV ALKAAGVDLV LSAFLHFHEE VEYFGKHVLP LVRELEQAQA
REAA
|
|---|
| |