| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_12400 |
|---|
| Symbol | thiE |
|---|
| ID | 4382006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 1067632 |
|---|
| End bp | 1068261 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639323553 |
|---|
| Product | thiamine-phosphate pyrophosphorylase |
|---|
| Protein accession | YP_789142 |
|---|
| Protein GI | 116052015 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0352] Thiamine monophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC GCGGCCTGTA CGCCATCACC GATAGCCAGC TACTGGACGA CGGCCGCCTG
CTGCCCTACG TCGAAGCCGC GCTACGCGGC GGCGCGCGCC TGCTGCAATA CCGCGACAAA
TCCAGCGACC AGGCGCGGCG CCTGCGCGAG GCGGAAAGCC TGCGCGAACT CTGCGAACGC
TACGGCGCGC AGTTGATCGT CAACGACGAC GCCGAACTCG CCGCGCGCCT GGGCGTCGGC
CTGCACCTCG GCCAGACCGA CGGTTCGCTG TCGGCGGCGC GCGCCCTGCT CGGCCGCCAG
GCGATCATCG GCGCCACCTG CCACGCCCGG CTGGAGCTGG CCGAGCAGGC GGTGGCCGAG
GGCGCCAGCT ACGTCGCCTT CGGCCGCTTC TTCAATTCCA GCACCAAACC CGGCGCCCCC
GCCGCCAGCG TCGAACTGCT CGACCAGGCC CGGCCGCGCC TGCACCTGCC GATCACCGCC
ATCGGCGGCA TCAGCCTCGA TACCGCGCCC GGTCTGATCG CCCGCGGCGT CGATCTGGTC
GCCGTGATCC ATGCGCTGTT CGCCGCCGCG TCCGCCGCCG AGGTGGAACG CCGCGCCCGC
GCCTTCAGCG CCCTGTTCGA ACCTGCCTGA
|
|---|
| Protein sequence | MKLRGLYAIT DSQLLDDGRL LPYVEAALRG GARLLQYRDK SSDQARRLRE AESLRELCER
YGAQLIVNDD AELAARLGVG LHLGQTDGSL SAARALLGRQ AIIGATCHAR LELAEQAVAE
GASYVAFGRF FNSSTKPGAP AASVELLDQA RPRLHLPITA IGGISLDTAP GLIARGVDLV
AVIHALFAAA SAAEVERRAR AFSALFEPA
|
|---|
| |