Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_11930 |
Symbol | |
ID | 4383500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1032325 |
End bp | 1033035 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639323517 |
Product | hypothetical protein |
Protein accession | YP_789106 |
Protein GI | 116052051 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1346] Putative effector of murein hydrolase |
TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0000775125 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTGGC AGGCCGCCCT CGAGGCGGTG ATCCACCATC CGCTGTTCGG CGTCGGCGTG ACCCTGGGCG CCTACCAGTT GGCCCTGGCC GCCTATGAAC GGACCCGCTG GGTGTTCCTG CAGCCGGTGC TGGTGTCGAT GCTGGTGGTG ATCGGCGTAC TGCTGCTTTG CGGCATCGAC TACGACGAAT ACAGTGCCAG CGCCAAGGTC CTGACCATTC TCCTCGGCCC CGCCACGGTG GCCCTGGCGG TGCCGCTGTT CCTCAACCTG CGGCGTATCC GCCAATTGTT CTGGCCGACC CTGCTGACCC TGGTGGTCGC CGGTACGCTG GCGACGGTGC TGGGCATCGC ATTCGGCTGG TTGTTCGGTG CCGAGCCGCG GATGCTGATG AGCATGGCGC CGAAGTCGGT GACCTCGCCG ATCGCCATGC TGGTGGCCAG CCAGATCGGC GGCGTGGCGG CGCTGGCCGC CGTGTTCGTA CTGATCACCG GGGTGCTCGG GGCGATCCTC GGGCCGGAGC TGCTGCGCGC CATCGGCGTC CGGCACCCCG CCGCGCAGGG CATGGCGCTG GGCATGACGG CCCACGCGGT GGGCACGTCG CGGGCCTTGC AGGAAGGCGA GGAGTGTGGT GCCTTCGCCG CCCTGGCGAT GAGCCTGATG GGCGTTGCCA CCGCAGTGCT GCTACCGTTG GCGGTAGCGC TGGTTGCCTG A
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Protein sequence | MAWQAALEAV IHHPLFGVGV TLGAYQLALA AYERTRWVFL QPVLVSMLVV IGVLLLCGID YDEYSASAKV LTILLGPATV ALAVPLFLNL RRIRQLFWPT LLTLVVAGTL ATVLGIAFGW LFGAEPRMLM SMAPKSVTSP IAMLVASQIG GVAALAAVFV LITGVLGAIL GPELLRAIGV RHPAAQGMAL GMTAHAVGTS RALQEGEECG AFAALAMSLM GVATAVLLPL AVALVA
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