| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_11490 |
|---|
| Symbol | |
|---|
| ID | 4382719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 995090 |
|---|
| End bp | 995734 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639323482 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_789071 |
|---|
| Protein GI | 116052085 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3577] Predicted aspartyl protease |
|---|
| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGGC TGTGCGTCGC CCTGTTTTCC AGCGTTCTCG CGTTGTCCTC GCTGGCCGCG
CCCCAGGTGT TCGTGGTCGG CCTGTTCCCC GGCGCGGCGG TACTCAACGT CGATGGCCAG
CGCAAGCTGG TCAGGGTCGG CCAGACCGGC CCGCAGGGCG TCCAGGTGGT CAGCGCCGAC
AGCCGCAAGG CGGTGCTGCG GATCGACGGC GTCGAGCGCA CCTACGAACT GAGCCGCGAA
TACAACGAGG CGGGCTATTC GGCGCCGCAG CGGCAAAGCT TCAGCATCGC TCGCGGCACC
GGCGGGCACT ATTGGGTGGC TGGCTCGGTG AACGGGCAGA ACATGCAGTT CCTGGTGGAT
ACCGGCGCCA CCAGCATCGC CATGAACGAG AACGAGGCGC GCCGCCTGGG TATCGATTAC
CGGGTGGACG GCAAGCCGAT GGTCGCCTCC ACCGCCAGCG GCACCTCGCG CGGCTGGCGG
GTGACCCTGG ACCGGGTGAA GATCGGCGGT ATCGAGTTGC TGGGTGTCGA GGCGGCGGTG
ATCGAGGGTG GCTATCCGAC CGAAGCCCTG CTCGGCATGA GTTTCCTCAA CCGGGTGCGT
TGGCGCGAGG AACAGGGAAT GCTGCTTATC GAGGCCAAGC ATTGA
|
|---|
| Protein sequence | MLRLCVALFS SVLALSSLAA PQVFVVGLFP GAAVLNVDGQ RKLVRVGQTG PQGVQVVSAD
SRKAVLRIDG VERTYELSRE YNEAGYSAPQ RQSFSIARGT GGHYWVAGSV NGQNMQFLVD
TGATSIAMNE NEARRLGIDY RVDGKPMVAS TASGTSRGWR VTLDRVKIGG IELLGVEAAV
IEGGYPTEAL LGMSFLNRVR WREEQGMLLI EAKH
|
|---|
| |