| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_11310 |
|---|
| Symbol | |
|---|
| ID | 4382053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 983821 |
|---|
| End bp | 984525 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639323467 |
|---|
| Product | ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_789056 |
|---|
| Protein GI | 116052100 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.440508 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAC TGATCACCCT GACCAACCTC GGCTTCGCCT GGCCCGGCCA GGCGGAGTTG
CTGGACATTC CCAGCTTCCA TCTCGAACGC GGCGAGAGCC TGTTCCTCAA GGGGCCTTCC
GGCAGCGGCA AGACCACCCT GCTCGGCCTC CTCGGCGGCG TGCAGAAGCC CGGCCGCGGC
AGCATCCGCC TGCTCGGCGA GGACCTGGAA AAGCTGTCCG CCGCGCGCCG CGACCATTTC
CGCGTCGACC ACACCGGCTA CATCTTCCAG CAGTTCAACC TGCTGCCATT CCTCTCGGTA
CGCGAGAACG TCGAGCTGCC CTGTCACTTT TCCGCGTTGC GCCGTCAGCG CGCCCGCGAA
CGCCACGGTA GCCCGGCGCA GGCCGCCAGC CATCTGCTCG GCCAGCTCGG CCTCGGCGGC
GAACTGCACG AACGCCGCGC CGACAGCCTG TCCATCGGCC AGCAGCAGCG GGTCGCCGCC
GCCCGCGCGC TGATCGGCCA GCCGGAGCTG GTGATCGCCG ACGAGCCGAC CTCGGCGCTC
GACGCCGACA GCCGCGAGGC GTTTCTCCAG TTGCTCTTCG CCGAATGCCG CGAGGCCGGC
GCCAGCCTGC TGTTCGTCAG CCACGACCAG AGCCTGGCCG GGCTGTTCGA CCGCAGCCTG
TCCCTTTCCG ATCTCAACCG CGCCGCCCGG CCGGCAGGAC TCTGA
|
|---|
| Protein sequence | MSALITLTNL GFAWPGQAEL LDIPSFHLER GESLFLKGPS GSGKTTLLGL LGGVQKPGRG
SIRLLGEDLE KLSAARRDHF RVDHTGYIFQ QFNLLPFLSV RENVELPCHF SALRRQRARE
RHGSPAQAAS HLLGQLGLGG ELHERRADSL SIGQQQRVAA ARALIGQPEL VIADEPTSAL
DADSREAFLQ LLFAECREAG ASLLFVSHDQ SLAGLFDRSL SLSDLNRAAR PAGL
|
|---|
| |