| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_11210 |
|---|
| Symbol | |
|---|
| ID | 4382061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 975501 |
|---|
| End bp | 976991 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639323459 |
|---|
| Product | putative amino acid permease |
|---|
| Protein accession | YP_789048 |
|---|
| Protein GI | 116052108 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.878559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAACT CCAGACTCAC CCAGCACCTG CTCCGCGGGC GGGTTGGTTT CCCCACCGCC
CTGGCCAGTT CGGTCGGGTT GATCATGGCC AGCCCGGTGA TCCTCACCGC CACCACCGGC
TTCGGCCTGG GCGGCGGAAC CTTCGCCGTG GCGATGCTGG TGGCGCTGCT GCTGATGCTG
GCGCAGTCCA CCACCTTCGC CGAGGCCGCC TGCCTGCTGC CGACCCGTGG CTCGGTCTAC
GACTACCTGT CGTGCGGCCT CGGGCGCTTC TTCGCGATCA CCGGCACGCT GTCGGCCTAC
CTGATCGTCC ATGTGTTCGC CGGCACCGCC GAAACCATGC TCAGCGGCAC CATGGCGCTG
GTCAACTTCG AGTCGCTGAA TACCCTCACC GAGCCGGGCG GCGGCGCCTG GCTGGTGGGT
GTCGGCATGG TGCTCTGCTT CGGCCTGCTG AATGCGCTGG GGATCACCGC CTTCGGTCGC
GCCGAAGTGA TCCTCACCTT CGGCATGTGG AGCACCCTGA TGATCTTCGC CGTGGCCGGT
CTGCTGCGCC TGCCCGCGGT GGAGTTGCAG GGCTGGTTCG GGGCCTCGAT GGTCGGCGAC
GACCTGCCGA CCCTGCTGTC GCTGGTGGGC ATGGCGATGT TCATGTTCGT CGGTTGCGAA
TTCGTCACGC CGCTGGCGCC GGAGGTGCGC CACGCTTCGC GGACCCTGCC GCGGGCGATG
GCCCTGGGGT TGGTCGGGGT GGCCTGCTGC ATGTTCCTCT ATGGCGCGGC GATGCGCCGG
CAGGTGGAAA ACCTCGACCT CGGCGGCGGC CTGCACCTGC TGGAGACGCC GATGGCGATC
CCGCGATTCG CCGAGCAGGT GATGGGACCG TTCGGACGCA TCTGGCTGGG CGTGGGCCTG
CTGTTCGCCG GGGCCGCCAC CATCAACACC CTGATGGCCG GCCTGCCGCG GATTCTCTAC
GGGATGGCGC TGGATGGCGC CTTGCCGAAG GCCTTCACCT ACCTGCACCC GCGCTTCAAG
ACACCGTTGC TGTGCATCGC CGTGGCAGCG GCGATTCCCT GCCTGCACGC CTGGTGGCTG
GGCGGCGACA GCGAAGGGAT CATCCACCTG GTCCTGGCGG CGGTCTGCGC CTGGGGCACC
GCCTACCTGC TGGTGACCCT CTCCGTGGTG CTGCTGCGCA TCCGTCGCCC GGACCTGCCG
CGCGCCTACC GCTCGCCGCT GTTCCCGTTG CCGCAGCTGT TCTCCAGCGC CGGAATCCTG
CTGGGGATGT TCTACATCAC GCCGCCGGGT ATGAACCCCG CCGACATCTA CCTGCCGTTC
GCCCTGATGC TCGGCCTGGC GGCCGCCTAC GCCCTGTTCT GGACCCTGTG CGTACAGCGG
GTGAATCCGT TCCGTCCGCT GGCGGTGGAA GAGGTGCTGG AGAAGGAATT CGCCGAAGAG
GACCAGCAGC AGCGGGAGAA GGCGCATGTC CGCCTGGGCG CGCTGGTATG A
|
|---|
| Protein sequence | MSNSRLTQHL LRGRVGFPTA LASSVGLIMA SPVILTATTG FGLGGGTFAV AMLVALLLML
AQSTTFAEAA CLLPTRGSVY DYLSCGLGRF FAITGTLSAY LIVHVFAGTA ETMLSGTMAL
VNFESLNTLT EPGGGAWLVG VGMVLCFGLL NALGITAFGR AEVILTFGMW STLMIFAVAG
LLRLPAVELQ GWFGASMVGD DLPTLLSLVG MAMFMFVGCE FVTPLAPEVR HASRTLPRAM
ALGLVGVACC MFLYGAAMRR QVENLDLGGG LHLLETPMAI PRFAEQVMGP FGRIWLGVGL
LFAGAATINT LMAGLPRILY GMALDGALPK AFTYLHPRFK TPLLCIAVAA AIPCLHAWWL
GGDSEGIIHL VLAAVCAWGT AYLLVTLSVV LLRIRRPDLP RAYRSPLFPL PQLFSSAGIL
LGMFYITPPG MNPADIYLPF ALMLGLAAAY ALFWTLCVQR VNPFRPLAVE EVLEKEFAEE
DQQQREKAHV RLGALV
|
|---|
| |