Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_11070 |
Symbol | cupB2 |
ID | 4382074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 957412 |
End bp | 958158 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639323446 |
Product | chaperone CupB2 |
Protein accession | YP_789035 |
Protein GI | 116052121 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.745503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCCGC TAATGCATCG TTTTCATTCT TTCGTGGCGG CAAGCGCCGT GGCCATCGCC CTGTGCGCCG GAACGGCTCA TGCCGGGCTG ATCGCACAGG GCACTCGCGT CGTCTTTCCG GCCAGCGAGC GCGAGGTCAC CTTGCGGGTC AGCAATACGT CCGGCACTCC CGTGCTGGCG CAAGCCTGGA TCGACGATGG CCGGCAGGAC GTTCCCCCCG AGGAACTGCA GGTCCCCTTC AGCGTCACGC CGGCCGTGAC GCGAGTGGAC CCCAATGGCG GCGCCGTATT GCGCATCGCC TACCTGAAGG CCCCGTTGCC GACGGATCGC GAATCGCTGT TCTGGCTGAA TATCCTGGAA GTTCCGCCCA GGGACGAAGA CGAAAACAAT GCATTGCAGT TTTCCTTTCG TTCGCGCTTC AAACTCTTCT TTCGACCCAG CCAGTTGAAG AGTGTCGATT CGGCTGCCGG GAAACTTCAA TGGAAGTTTC TGGAGTCAGG GGGAGCAGGA AAAAAGACCG TAGTACAGGT AAATAATCCG ACGCCTTACT ACGTTTCGTT CGCCAGCGTC GAATTGATTG TCGATGGCCG TGTCATGTCC GTGGGAAAGG GAATGGTCGC GCCATTCTCG ACGAAGGAGT TCGACTGGCA GGGAAATCCG AAGAACATGG AAGCCGCTTC CGTCAGATAC GAAGTCATCA ACGATTACGG TGGCCGCAAT ACCCTCGATA GGGCACTCGG CAAATAA
|
Protein sequence | MAPLMHRFHS FVAASAVAIA LCAGTAHAGL IAQGTRVVFP ASEREVTLRV SNTSGTPVLA QAWIDDGRQD VPPEELQVPF SVTPAVTRVD PNGGAVLRIA YLKAPLPTDR ESLFWLNILE VPPRDEDENN ALQFSFRSRF KLFFRPSQLK SVDSAAGKLQ WKFLESGGAG KKTVVQVNNP TPYYVSFASV ELIVDGRVMS VGKGMVAPFS TKEFDWQGNP KNMEAASVRY EVINDYGGRN TLDRALGK
|
| |