Gene PA14_10990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_10990 
SymbolhpaC 
ID4382081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp950502 
End bp951014 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content68% 
IMG OID639323439 
Product4-hydroxyphenylacetate 3-monooxygenase small chain 
Protein accessionYP_789028 
Protein GI116052128 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID[TIGR02296] 4-hydroxyphenylacetate 3-monooxygenase, reductase component 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.699106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGC TCGAACCCAG GCAGCAAGCC TTCCGCAACG CCATGGCGCA TCTTTCGGCG 
GCGGTCAACG TGATCACCAG CAACGGCCCG GCCGGACGCT GCGGGATCAC CGCCACCGCG
GTCTGCTCGG TCACCGACAG CCCGCCGACG CTGATGCTCT GCATCAACCG CAACAGCGAG
ATGAACACGG TGTTCAAGGC CAACGGCCGG CTCTGCGTGA ACGTCCTCAG CGGCGAACAC
GAAGAGGTGG CCCGCCACTT CGCCGGCATG ACCGAGGTCC CGATGGAACG CCGCTTCGCC
CTCCACGACT GGCGCGAGGG CCTCGCCGGG TTGCCGGTGC TGCACGGCGC CCTGGCCAAC
CTGCAGGGAC GCATCGCCGA GGTCCAGGAG ATCGGCACCC ATTCGGTGCT GTTGCTGGAG
CTGGAGGACA TCCAGGTCCT CGAACAGGGC GACGGCCTGG TCTACTTCAG CCGCAGCTTC
CATCGCCTGC AGCGAGCCTG CCGAGCCGCC TGA
 
Protein sequence
MSQLEPRQQA FRNAMAHLSA AVNVITSNGP AGRCGITATA VCSVTDSPPT LMLCINRNSE 
MNTVFKANGR LCVNVLSGEH EEVARHFAGM TEVPMERRFA LHDWREGLAG LPVLHGALAN
LQGRIAEVQE IGTHSVLLLE LEDIQVLEQG DGLVYFSRSF HRLQRACRAA