| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_10870 |
|---|
| Symbol | |
|---|
| ID | 4382091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 940586 |
|---|
| End bp | 941890 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639323429 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_789018 |
|---|
| Protein GI | 116052138 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3659] Carbohydrate-selective porin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00009778 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCC TCCGCACCTT GCCGGCGCTG CTCTGCGCCG GTTTCCTCGG TCTCTCCGCG
CAGGCCGCCG AAGACAGCCG CAGCGGCCCG CTGGCCGGGT TCGGCGAACG ACTCCAGCGC
CACGGCGTGA AGACCCACGC GCAGTTCTGG AGCCTGTCGC TGAAGAACCT CGACACCGGC
CCGCGCCAGC ACAGCTTCGG CAACAGCGGC GACCTGTTCC TCGGCGCCGA CCTCGACCTC
GCCACCCTCG CCGGCCTGGA CGGCGCCTCG CTGCACATCG AGGAAACCCT GTTCATCCTC
GACCGCGGCA CCGGTCAGCC CACCGGGCCG AGCTGGCAGG GCGCGGTGGG CAGCTACTTC
GGCGGCGCGC CGCTGCACAA CGACATCGGC GCCAACCAGC TGAGCCTGCT CACCTGGCAG
CAGCAGTGGC TGGGCGGACG CCTCGACAGC CATCTCGGAC GCACCAATGC GCGGCGCTAT
TTCCTGATCT ACAACTGCGA GACCGTGGTC ACCTGCAATG ACCCGATCAT CGACGCCTCC
ACCGGCATCC TGCCGCCGCC CTACGGCGCC TGGGGCGGCT ACCTGAAGTA CCGGGCGACC
CCGACCCTGT ACCTGCACGC CGGGGCCTTC GAGTCCAACC CGGTGGATTA CCTGAAGAAG
CGCCATGGCC TCGATTTCGG CACCGACGAC GCCAGCGGCA CCAGCCTGCT GCTGGGGATC
GGCGACAAGC GCGAGGAAAG CCTCGATCCC TATCGCTCGC ACTATGAACT CAATGCCTAC
CTGAACACCG CCAACCAGGT CGACCCGCTC ACCGGCGCCA GCGACCACGG CAGCGCCGGC
GGCTTCTTCA AGTTCCAGCA GCTGTTCTGG CGCGCCGACG GCGGCCGCCT CGATTCGCCG
AGGGCGCTGG GGCTGTTCGG CTCGCTGTCG GTATCAGCCG ACGACAAGCA GCCGTTCCGT
CATTTCGCCG AGCTGGGCAT GACCTACCAT GCACCCTTCG ACCGCACGCG GGACAAGCTC
AACCTCAAGG CCAGCTACCT GCGCCTGAAC GATCACCAGC TGGAGTTCCA GCGCCAGGCG
CGGATCGCCG CTGGCGGCGA TGCGAAACTC GGCCAGCGCG ACGTGTACGC CCTGGAAACC
AATGCGCACA TCGCACTGAC CCCGCACATC GCGCTGGAGC CGTCGGTGCA GTACATCTTC
AACCCGGACA ACTACTACAA CCCCGGCGCT CGCGAACTGA GTGGAGACGG TTTCGTCGTC
GGCCTGCAAC TGATGGTCGA CATGGGCTCG CTGCTGGGGC TTTAG
|
|---|
| Protein sequence | MKTLRTLPAL LCAGFLGLSA QAAEDSRSGP LAGFGERLQR HGVKTHAQFW SLSLKNLDTG
PRQHSFGNSG DLFLGADLDL ATLAGLDGAS LHIEETLFIL DRGTGQPTGP SWQGAVGSYF
GGAPLHNDIG ANQLSLLTWQ QQWLGGRLDS HLGRTNARRY FLIYNCETVV TCNDPIIDAS
TGILPPPYGA WGGYLKYRAT PTLYLHAGAF ESNPVDYLKK RHGLDFGTDD ASGTSLLLGI
GDKREESLDP YRSHYELNAY LNTANQVDPL TGASDHGSAG GFFKFQQLFW RADGGRLDSP
RALGLFGSLS VSADDKQPFR HFAELGMTYH APFDRTRDKL NLKASYLRLN DHQLEFQRQA
RIAAGGDAKL GQRDVYALET NAHIALTPHI ALEPSVQYIF NPDNYYNPGA RELSGDGFVV
GLQLMVDMGS LLGL
|
|---|
| |