| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_10750 |
|---|
| Symbol | |
|---|
| ID | 4382100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 926433 |
|---|
| End bp | 927623 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639323420 |
|---|
| Product | sugar efflux transporter |
|---|
| Protein accession | YP_789009 |
|---|
| Protein GI | 116052147 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGCA CCTCCGAAAC CCGCAGCGGC AGCTGGCTGA GCGTGATCGC CCTGGCCCTG
GCCGCCTTCA TCTTCAACAC CACGGAGTTC GTCCCGGTCG GCCTGCTCAG CGACATCGGC
CACAGCTTCG AGATGCCCAC CTCGCAGGTC GGCCTGATGT TGACCATCTA TGCCTGGGTG
GTGTCGCTGG CCTCGTTGCC GATGATGCTG CTGACCCGCA ATATCGAGCG GCGCAAGCTG
CTGGTCGGGG TATTCCTGCT GTTCATCGCC AGCCACGTGC TGTCCGGGCT GGCCTGGAGC
TTCCAGGTGC TGATGCTCAG CCGGATCGGC ATTGCCTTCG CCCACGCGGT GTTCTGGGCC
ATCACCGCTT CGCTGGCGGT GCGCGTGGCG CCGCCGGGAC AGCAGGCCAA GGCGCTAGGG
CTGCTGGCCA CCGGCACCAC CCTGGCGATG GTCCTGGGCA TCCCGCTGGG GCGGGTGGTC
GGCGAGGCCC TGGGCTGGCG TACCACCTTC ATGGCCATCG CCGGACTCTC GGTGCTGACC
TTGCTCTACC TGGCGCGCTC CCTGCCGCTG CTGCCAAGCC AGAATTCCGG TTCCCTGCGC
AGCCTGCCGA TGCTGTTCCG ACGCCCGGCG CTGGTTTGCC TGTACGTGCT GACCGTGGTG
GTGATCAGCG CCCAGTTCAC CGCCTACAGC TACATCGAGC CCTTCGCCAA GCAGGTGGCG
CAGATGAGCG GCGAGGCGAC CACCCTGCTG TTGCTGTTGT TCGGCGGCGC CGGGATCTTC
GGTTCGATCC TCTTCAGCCG CTACAGCGAG GCTTTCCCGC GAGGCTTCCT GCTGGCCGCG
ATCCTCGCCT TGGGCAGCAG CCTGGCGCTG CTGTTGCCGC TGTCCGCGCA GCCGACCTGG
CTGATGGCGC TCAGCCTGCT CTGGGGCATG TCGATCATGT GCTTCGGCCT GGCCCAGCAG
TCCCGCGTCC TGCGCCTCGC CTCGGACGCC ACCGACGTGG CCATGGCGCT GTTCTCCGGC
CTGTACAACG TCGGCATCGG CGCCGGCGCG CTGCTCGGCA GCGTGGTCAG CGAACGCATG
GGCCTGGCCT CGATCGGCAA CGTCGGCGCC GCGCTGGCGC TGGCCGGCCT GCTGCTCGCC
CTGTTCGCCG CACTGCGCTA CGCGGAGGCG CTGAAAACCA CGTCGTTGTG A
|
|---|
| Protein sequence | MDSTSETRSG SWLSVIALAL AAFIFNTTEF VPVGLLSDIG HSFEMPTSQV GLMLTIYAWV
VSLASLPMML LTRNIERRKL LVGVFLLFIA SHVLSGLAWS FQVLMLSRIG IAFAHAVFWA
ITASLAVRVA PPGQQAKALG LLATGTTLAM VLGIPLGRVV GEALGWRTTF MAIAGLSVLT
LLYLARSLPL LPSQNSGSLR SLPMLFRRPA LVCLYVLTVV VISAQFTAYS YIEPFAKQVA
QMSGEATTLL LLLFGGAGIF GSILFSRYSE AFPRGFLLAA ILALGSSLAL LLPLSAQPTW
LMALSLLWGM SIMCFGLAQQ SRVLRLASDA TDVAMALFSG LYNVGIGAGA LLGSVVSERM
GLASIGNVGA ALALAGLLLA LFAALRYAEA LKTTSL
|
|---|
| |