| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_10630 |
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| Symbol | hpcC |
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| ID | 4382130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 915383 |
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| End bp | 916843 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639323410 |
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| Product | 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase |
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| Protein accession | YP_788999 |
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| Protein GI | 116052157 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR02299] 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.45898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAC ACTGGATCAA TGGCCGCGAG GTCGAAAGCA AGGACGTCTT CGAGAACTAC
AACCCGGCCA CCGGCGAGCT GATCGGCGAG GTCGCCAGCG GCGGCGCGGC GGAAATCGAC
GCGGCGGTGG CGGCGGCCCG GGAAGCCTTC CCGAAATGGG CCAATACCCC GGCCAAGGAG
CGCGCGCGCC TGATGCGCCG GCTCGGCGAG CTGATCGACC GGAACGTGCC GCACCTGGCG
GAACTGGAGA CCCTCGACAC CGGCCTGCCG ATCCACCAGA CGAAGAATGT GCTGATCCCG
CGCGCCTCGC ACAACTTCGA GTTCTTCGCC GAAGTCTGCA CGCGGATGAA CGGGCACAGC
TATCCGGTCG ACGACCAGAT GCTCAACTAC ACCCTGTACC AGCCGGTGGG CGTCTGTGGC
CTGGTCTCGC CGTGGAACGT ACCGTTCATG ACCGCCACCT GGAAGACCGC GCCGTGCCTG
GCGCTGGGCA ACACGGCGGT GCTGAAGATG TCCGAGCTGT CGCCGCTGAC CGCCAACGAG
CTGGGCCGCC TGGTGCACGA GGCGGGCATT CCGCCGGGGG TGTTCAACGT GGTCCAGGGC
TACGGCGCCA GCGCCGGCGA CGCGCTGGTT CGCCACCGCG ACGTGCGCGC GGTGTCCTTC
ACCGGCGGCA CCGCCACCGG GCGACGAATC ATGGAGGCGG CCGGCATCAA GAAATACTCG
ATGGAGCTGG GCGGCAAGTC GCCGGTGCTG GTCTTCGAGG ACGCCGACCT CGAGCGGGCG
CTGGACGCCG CGCTGTTCAC CATCTTCTCG CTGAACGGCG AGCGCTGCAC CGCCGGCAGT
CGCATCTTCG TCCAGGAAAG CGTCTACCCG CAGTTCGTCG CCGAGTTCGC CGCGCGCGCC
AGGCGCCTGA TCGTCGGCGA TCCGCAGGAC CCGAAGACCC AGGTCGGCTC GATGATCACC
CAGGCCCACT ACGACAAGGT CACCGGCTAC ATCCGCATCG GCCTCGAGGA AGGCGCCACC
CTGGTGGCCG GCGGCCTGGA GCGTCCGACC GGCCTGCCGG CGCACCTGAG CAAGGGGCAG
TTCATCCAGC CCACGGTGTT CGCCGACGTG GACAACCGCA TGCGCATCGC CCAGGAGGAG
ATCTTCGGCC CGGTGGTCTG CCTAATCCCG TTCAAGGACG AAGCCGAGGC GCTGCGCCTG
GCCAACGACG TGGAATACGG CCTGGCCTCC TACATCTGGA CCCAGGACAT CGGCAAGGCC
CATCGCCTGG CACGCGGCAT CGAGGCCGGG ATGGTCTTCA TCAACAGCCA GAACGTGCGC
GACCTGCGCC AGCCGTTCGG CGGGGTGAAG GCCTCGGGCA CCGGACGCGA AGGCGGGGAA
TACAGCTTCG AGGTATTCGC CGAGATCAAG AACGTGTGTA TATCCATGGG CAGCCATCAC
ATCCCCCGCT GGGGCGTGTA G
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| Protein sequence | MIKHWINGRE VESKDVFENY NPATGELIGE VASGGAAEID AAVAAAREAF PKWANTPAKE
RARLMRRLGE LIDRNVPHLA ELETLDTGLP IHQTKNVLIP RASHNFEFFA EVCTRMNGHS
YPVDDQMLNY TLYQPVGVCG LVSPWNVPFM TATWKTAPCL ALGNTAVLKM SELSPLTANE
LGRLVHEAGI PPGVFNVVQG YGASAGDALV RHRDVRAVSF TGGTATGRRI MEAAGIKKYS
MELGGKSPVL VFEDADLERA LDAALFTIFS LNGERCTAGS RIFVQESVYP QFVAEFAARA
RRLIVGDPQD PKTQVGSMIT QAHYDKVTGY IRIGLEEGAT LVAGGLERPT GLPAHLSKGQ
FIQPTVFADV DNRMRIAQEE IFGPVVCLIP FKDEAEALRL ANDVEYGLAS YIWTQDIGKA
HRLARGIEAG MVFINSQNVR DLRQPFGGVK ASGTGREGGE YSFEVFAEIK NVCISMGSHH
IPRWGV
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