| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_10550 |
|---|
| Symbol | |
|---|
| ID | 4382137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 908648 |
|---|
| End bp | 910321 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639323403 |
|---|
| Product | putative sulfite or nitrite reductas |
|---|
| Protein accession | YP_788992 |
|---|
| Protein GI | 116052164 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACCAGT ACGACGAATA CGACCAGGCG CTGGTGAGCG AGCGGGTGGC GCAGTTCCGC
GACCAGATCG CCCGCCGCCT CGACGGCGAA CTGAGCGAGG AGGAGTTCCT CCCGCTGCGC
CTGCAGAACG GCCTGTACCT GCAGAAGCAC GCCTACATGC TGCGCGTGGC GATTCCCTAC
GGCACCCTCT CGTCGCCGCA ACTGCGCGCC TTGGCGCACG TCGCCCGGCA CTACGACCGC
GGCTACGGGC ACTTCACCAC GCGGCAGAAC ATCCAGTTCA ACTGGATCGA ACTGGAGCAG
GTCGGCGATA TCCTCGAACA CCTCGCCGGC GCGCAGATGC ATGCGATCCA GACCTCCGGC
AACTGCGTGC GCAACATCAC CACCGAAGCC TTCGCCGGGG TCGCCGCGGA CGAATGGACC
GACCCCCGGC CGCTGGCCGA GATCCTGCGC CAGTGGTCGA CGGTGAACCC GGAGTTCCTG
TTCCTCCCGC GCAAGTTCAA GATCGCCCTC AGTTCGGCGG TGGAAGACCG CGCCGCGGTG
CAGATGCACG ACATCGGCCT GTACCTTTAC CGCCACCCCG ACGCCGGCGA GTTGCGCCTG
CGGGTCCTGG TCGGCGGCGG CCTGGGACGC ACGCCGATGC TCGGCCAGGT GATCCGCGAC
GACCTGCCCT GGCAGCACCT GTTGTCCTAC GTCGAGGCGA TCCTGCGGGT CTACAACCGC
TACGGCCGGC GCGACAACAA GTACAAGGCG CGGATCAAGA TCCTGGTCAA GGCGCTGGGC
ATCGAGGCTT TCGCCCGCGA GGTGGAGGAA GAGTGGCAGC ACCTGCGCGA CGGCCCGGCA
CAACTGACTG CCGAGGAGTG CCAGCGGGTC GCCGAGCGCT TCGTATTGCC GCGCTACCTG
CCGCCGGCCG GCGGCGAGCT GGCCTACGGC AGCGCCCGTG CGGTCGATCC GGCCTTCGCC
CGCTGGGCCT CGCGCAACGT CCAGGCGCAC AAGGTGCCGG GCTACGCCTC GGTGGTGCTG
TCGACCAAGC CCGGCGCCAG CGCGCCGCCG GGCGACGTCA CCGCGGAGCA GATGGAACGC
GTCGCCGACT GGGCCGAGCG CTACGGTTTC GGCGAGATCC GCGTGGCCCA CGAACAGAAC
CTGGTGCTCC CCGACGTGCG CCTGGAGAAC CTCCACGCGC TGTGGCGCGA GGCCTGCGCA
GCCGGCCTCG GCACGCCTAA CCAGGGCCTG CTCAGCGACA TCATCGCCTG TCCCGGCGGC
GACTACTGCG CGCTGGCCAA CGCCAAGTCG ATCCCCATCG CCCAGGGCAT CCAGCAGCGC
TTCGAGGACC TCGACCACCT GCACGACATC GGCGAGCTGA GCCTGAACAT CTCCGGCTGC
ATGAACGCCT GCGGCCACCA CCACATCGGC AACATCGGCA TCCTCGGCGT CGACAAGAAC
GGCAGCGAGT GGTACCAGGT CACCCTCGGC GGCGCCCAGG GCAAGGACAG CGCGCTGGGC
AAGGTGATCG GGCCATCGTT CAGCGCCGCC GAGGTGCCGG CGGTGATCGA ACGGATCGTC
GAAACCTTCA CCGACCTGCG GGTCGGCCCG GAACGTTTCA TCGACACCTT CAACCGGGTC
GGCCTGGAGC CGTTCAAGGC CCGGGTCTAC GCCAGGATGG AGGAACCGGC ATGA
|
|---|
| Protein sequence | MYQYDEYDQA LVSERVAQFR DQIARRLDGE LSEEEFLPLR LQNGLYLQKH AYMLRVAIPY
GTLSSPQLRA LAHVARHYDR GYGHFTTRQN IQFNWIELEQ VGDILEHLAG AQMHAIQTSG
NCVRNITTEA FAGVAADEWT DPRPLAEILR QWSTVNPEFL FLPRKFKIAL SSAVEDRAAV
QMHDIGLYLY RHPDAGELRL RVLVGGGLGR TPMLGQVIRD DLPWQHLLSY VEAILRVYNR
YGRRDNKYKA RIKILVKALG IEAFAREVEE EWQHLRDGPA QLTAEECQRV AERFVLPRYL
PPAGGELAYG SARAVDPAFA RWASRNVQAH KVPGYASVVL STKPGASAPP GDVTAEQMER
VADWAERYGF GEIRVAHEQN LVLPDVRLEN LHALWREACA AGLGTPNQGL LSDIIACPGG
DYCALANAKS IPIAQGIQQR FEDLDHLHDI GELSLNISGC MNACGHHHIG NIGILGVDKN
GSEWYQVTLG GAQGKDSALG KVIGPSFSAA EVPAVIERIV ETFTDLRVGP ERFIDTFNRV
GLEPFKARVY ARMEEPA
|
|---|
| |